Aliases for RPL17P2 Gene

Aliases for RPL17P2 Gene

  • Ribosomal Protein L17 Pseudogene 2 2 3 5
  • RPL17_13_1376 3

External Ids for RPL17P2 Gene

Previous GeneCards Identifiers for RPL17P2 Gene

  • GC14U900554
  • GC14M060680

Summaries for RPL17P2 Gene

GeneCards Summary for RPL17P2 Gene

RPL17P2 (Ribosomal Protein L17 Pseudogene 2) is a Pseudogene.

Additional gene information for RPL17P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL17P2 Gene

Genomics for RPL17P2 Gene

GeneHancer (GH) Regulatory Elements for RPL17P2 Gene

Promoters and enhancers for RPL17P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J060212 Enhancer 0.9 FANTOM5 500.7 +0.1 92 0.8 SP1 EP300 RELA TRIM22 POLR2A CBFB ARNT MEF2B CHD1 NBN RPL17P2 lnc-DHRS7-3 PPM1A LOC101927702 HSALNG0101694
GH14J060211 Enhancer 0.4 Ensembl 500.7 +1.6 1553 0.8 SCRT1 HDGF SCRT2 RPL17P2 lnc-DHRS7-3 PPM1A LOC101927702 HSALNG0101694
GH14J060215 Enhancer 0.4 Ensembl 0.7 -2.5 -2547 0.6 TBP YY1 ZNF687 POLR2A PPM1A LOC101927702 RPL17P2
GH14J060245 Promoter 0.7 EPDnew 0.3 -32.8 -32777 0.1 GATA2 ATF2 PRDM10 VEZF1 HDGF ATF7 ZNF366 GATA1 ARID1B CREM PPM1A LOC101927702 RPL17P2
GH14J060222 Enhancer 0.4 Ensembl 0.4 -9.7 -9747 0.2 EBF1 ZNF579 YY1 PPM1A LOC101927702 RPL17P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL17P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL17P2 Gene

Genomic Locations for RPL17P2 Gene
chr14:60,212,453-60,212,954
(GRCh38/hg38)
Size:
502 bases
Orientation:
Minus strand
chr14:60,679,180-60,679,748
(GRCh37/hg19)
Size:
569 bases
Orientation:
Minus strand

Genomic View for RPL17P2 Gene

Genes around RPL17P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P2 Gene

Proteins for RPL17P2 Gene

Post-translational modifications for RPL17P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P2 Gene

Domains & Families for RPL17P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL17P2 Gene

Function for RPL17P2 Gene

Phenotypes From GWAS Catalog for RPL17P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P2 Gene

Localization for RPL17P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P2 Gene

Pathways & Interactions for RPL17P2 Gene

PathCards logo

SuperPathways for RPL17P2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL17P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL17P2 Gene

Drugs & Compounds for RPL17P2 Gene

No Compound Related Data Available

Transcripts for RPL17P2 Gene

mRNA/cDNA for RPL17P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P2 Gene

No ASD Table

Relevant External Links for RPL17P2 Gene

GeneLoc Exon Structure for
RPL17P2

Expression for RPL17P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL17P2 Gene

genes like me logo Genes that share expression patterns with RPL17P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P2 Gene

Orthologs for RPL17P2 Gene

Evolution for RPL17P2 Gene

ENSEMBL:
Gene Tree for RPL17P2 (if available)
TreeFam:
Gene Tree for RPL17P2 (if available)

No data available for Orthologs for RPL17P2 Gene

Paralogs for RPL17P2 Gene

No data available for Paralogs for RPL17P2 Gene

Variants for RPL17P2 Gene

Additional Variant Information for RPL17P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P2 Gene

Disorders for RPL17P2 Gene

Additional Disease Information for RPL17P2

Genetic Association Database
(GAD)

No disorders were found for RPL17P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL17P2 Gene

Publications for RPL17P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54
  2. A genome-wide meta-analysis of genetic variants associated with allergic rhinitis and grass sensitization and their interaction with birth order. (PMID: 22036096) Ramasamy A … Jarvis DL (The Journal of allergy and clinical immunology 2011) 41 54

No data available for Mastermind for RPL17P2 Gene

Products for RPL17P2 Gene

Sources for RPL17P2 Gene