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Aliases for RPL17P11 Gene

Aliases for RPL17P11 Gene

  • Ribosomal Protein L17 Pseudogene 11 2 3 5
  • RPL17_3_336 3

External Ids for RPL17P11 Gene

Previous GeneCards Identifiers for RPL17P11 Gene

  • GC02U901610
  • GC02M234631

Summaries for RPL17P11 Gene

GeneCards Summary for RPL17P11 Gene

RPL17P11 (Ribosomal Protein L17 Pseudogene 11) is a Pseudogene.

Additional gene information for RPL17P11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P11 Gene

Genomics for RPL17P11 Gene

GeneHancer (GH) Regulatory Elements for RPL17P11 Gene

Promoters and enhancers for RPL17P11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I233722 Enhancer 0.2 FANTOM5 550.8 0.0 -28 0.1 GC02M233722 RPL17P11 MROH2A UGT1A4 UGT1A5 UGT1A3 UGT1A6 UGT1A7 UGT1A9 UGT1A10
GH02I233705 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 5.9 +15.6 15568 1.5 FOXA2 TAF1 MAX RAD21 YY1 GATA3 HNF4G RXRA CEBPB REST RPL17P11 ENSG00000224814 UGT1A6 UGT1A7 UGT1A9 UGT1A10 UGT1A8 UGT1A
GH02I233729 Promoter 0.8 EPDnew 0.4 -7.0 -6955 0.1 JUND RXRA ATF3 MAX ZBTB33 HNF4A YY1 UGT1A3 LOC100286922 RPL17P11 UGT1A4 UGT1A5 UGT1A6 UGT1A7 UGT1A9 UGT1A10 UGT1A8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL17P11 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL17P11 Gene

Genomic Locations for RPL17P11 Gene
chr2:233,721,492-233,722,110
(GRCh38/hg38)
Size:
619 bases
Orientation:
Minus strand
chr2:234,630,168-234,630,711
(GRCh37/hg19)

Genomic View for RPL17P11 Gene

Genes around RPL17P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P11 Gene

Proteins for RPL17P11 Gene

Post-translational modifications for RPL17P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P11 Gene

Domains & Families for RPL17P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P11 Gene

Function for RPL17P11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P11 Gene

Localization for RPL17P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P11 Gene

Pathways & Interactions for RPL17P11 Gene

SuperPathways for RPL17P11 Gene

No Data Available

Interacting Proteins for RPL17P11 Gene

Gene Ontology (GO) - Biological Process for RPL17P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P11 Gene

Drugs & Compounds for RPL17P11 Gene

No Compound Related Data Available

Transcripts for RPL17P11 Gene

mRNA/cDNA for RPL17P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P11 Gene

No ASD Table

Relevant External Links for RPL17P11 Gene

GeneLoc Exon Structure for
RPL17P11
ECgene alternative splicing isoforms for
RPL17P11

Expression for RPL17P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P11 Gene

mRNA differential expression in normal tissues according to GTEx for RPL17P11 Gene

This gene is overexpressed in Liver (x29.7), Kidney - Cortex (x4.6), and Bladder (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of RPL17P11 Gene:

RPL17P11
genes like me logo Genes that share expression patterns with RPL17P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P11 Gene

Orthologs for RPL17P11 Gene

Evolution for RPL17P11 Gene

ENSEMBL:
Gene Tree for RPL17P11 (if available)
TreeFam:
Gene Tree for RPL17P11 (if available)

No data available for Orthologs for RPL17P11 Gene

Paralogs for RPL17P11 Gene

No data available for Paralogs for RPL17P11 Gene

Variants for RPL17P11 Gene

Additional Variant Information for RPL17P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P11 Gene

Disorders for RPL17P11 Gene

No disorders were found for RPL17P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P11 Gene

Publications for RPL17P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL17P11 Gene

Sources for RPL17P11 Gene

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