Aliases for RPL15P6 Gene

Aliases for RPL15P6 Gene

  • Ribosomal Protein L15 Pseudogene 6 2 3
  • Ribosomal Protein L15 (RPL15) Pseudogene 5
  • RPL15_1_425 3
  • AC074276.1 5

External Ids for RPL15P6 Gene

Previous GeneCards Identifiers for RPL15P6 Gene

  • GC03U901239
  • GC03M157994

Summaries for RPL15P6 Gene

GeneCards Summary for RPL15P6 Gene

RPL15P6 (Ribosomal Protein L15 Pseudogene 6) is a Pseudogene.

Additional gene information for RPL15P6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL15P6 Gene

Genomics for RPL15P6 Gene

GeneHancer (GH) Regulatory Elements for RPL15P6 Gene

Promoters and enhancers for RPL15P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J158271 Enhancer 0.9 VISTA UCNEbase Ensembl 0.7 +4.2 4182 0.9 EP300 SPI1 POLR2A MLF1 RPL15P6 lnc-SHOX2-7 lnc-SHOX2-8 lnc-SHOX2-3 RSRC1
GH03J158164 Enhancer 1.8 VISTA UCNEbase Ensembl ENCODE 0.1 +108.9 108864 6.1 TCF12 JUND FOS ZNF639 TRIM28 HES1 TOE1 RUNX1 EP300 JUN MLF1 ENSG00000240207 lnc-SHOX2-3 RSRC1 RPL15P6 lnc-SHOX2-7
GH03J158279 Enhancer 0.3 Ensembl 0.7 -3.2 -3195 1.2 SPI1 DACH1 ENSG00000240207 RPL15P6 lnc-SHOX2-7 lnc-SHOX2-8 RSRC1
GH03J158291 Enhancer 0.5 VISTA UCNEbase 0.4 -16.0 -15969 1.3 ENSG00000240207 lnc-SHOX2-8 RPL15P6 lnc-SHOX2-7 RSRC1
GH03J158233 Enhancer 0.6 UCNEbase 0.3 +42.4 42380 0.2 EP300 TAL1 EZH2 SOX6 POLR2A CBFA2T3 RPL15P6 lnc-SHOX2-7 lnc-SHOX2-8 lnc-SHOX2-3 RSRC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL15P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL15P6 Gene

Genomic Locations for RPL15P6 Gene
chr3:158,275,809-158,276,421
(GRCh38/hg38)
Size:
613 bases
Orientation:
Minus strand
chr3:157,993,598-157,994,210
(GRCh37/hg19)
Size:
613 bases
Orientation:
Minus strand

Genomic View for RPL15P6 Gene

Genes around RPL15P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL15P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL15P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL15P6 Gene

Proteins for RPL15P6 Gene

Post-translational modifications for RPL15P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL15P6 Gene

Domains & Families for RPL15P6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL15P6 Gene

Function for RPL15P6 Gene

Phenotypes From GWAS Catalog for RPL15P6 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL15P6 Gene

Localization for RPL15P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL15P6 Gene

Pathways & Interactions for RPL15P6 Gene

PathCards logo

SuperPathways for RPL15P6 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL15P6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL15P6 Gene

Drugs & Compounds for RPL15P6 Gene

No Compound Related Data Available

Transcripts for RPL15P6 Gene

mRNA/cDNA for RPL15P6 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL15P6 Gene

No ASD Table

Relevant External Links for RPL15P6 Gene

GeneLoc Exon Structure for
RPL15P6

Expression for RPL15P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL15P6 Gene

genes like me logo Genes that share expression patterns with RPL15P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL15P6 Gene

Orthologs for RPL15P6 Gene

Evolution for RPL15P6 Gene

ENSEMBL:
Gene Tree for RPL15P6 (if available)
TreeFam:
Gene Tree for RPL15P6 (if available)

No data available for Orthologs for RPL15P6 Gene

Paralogs for RPL15P6 Gene

No data available for Paralogs for RPL15P6 Gene

Variants for RPL15P6 Gene

Additional Variant Information for RPL15P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL15P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL15P6 Gene

Disorders for RPL15P6 Gene

No disorders were found for RPL15P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL15P6 Gene

Publications for RPL15P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

No data available for Mastermind for RPL15P6 Gene

Products for RPL15P6 Gene

Sources for RPL15P6 Gene