Aliases for RPL15P4 Gene

Aliases for RPL15P4 Gene

  • Ribosomal Protein L15 Pseudogene 4 2 3 5
  • Em:AC006046.2 2 3
  • RPL15_4_680 3
  • RPL15P4 5

External Ids for RPL15P4 Gene

Previous GeneCards Identifiers for RPL15P4 Gene

  • GC00U914413
  • GC06U900678
  • GC06P031608
  • GC06P031610
  • GC06P031497
  • GC06P031498
  • GC06P031282
  • GC06Pi31508
  • GC06P031499
  • GC06P031529
  • GC06P031530
  • GC06P032307
  • GC06P032495
  • GC06P032600
  • GC06P033393
  • GC06P031531
  • GC06P031532
  • GC06P031533
  • GC06P031534
  • GC06P031537
  • GC06P031987
  • GC06P032137
  • GC06P032140

Summaries for RPL15P4 Gene

GeneCards Summary for RPL15P4 Gene

RPL15P4 (Ribosomal Protein L15 Pseudogene 4) is a Pseudogene.

Additional gene information for RPL15P4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL15P4 Gene

Genomics for RPL15P4 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL15P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J031526 Enhancer 0.9 Ensembl ENCODE 600.7 -1.8 -1771 2.6 ZNF629 IKZF1 JUND REST DPF2 MCM7 ZBTB44 MGA RFX1 CTBP1 RPL15P4 lnc-MCCD1-1 MICB DDX39B ENSG00000272221 HCG22 HCG23 MCCD1 PPIAP9 MG828730-062
GH06J031528 Promoter 0.8 EPDnew 600.7 +0.9 871 0.1 NFKBIZ POLR2A ZIC2 SCRT2 REST ZNF585B ZNF423 RBM22 TFDP1 PCBP1 MCCD1 RPL15P4 lnc-MCCD1-1 ZBTB12 PRR3 DXO GTF2H4 MICB MG828730-062
GH06J031529 Enhancer 0.7 ENCODE 600.7 +1.4 1447 0.3 GATAD2A NFKBIZ POLR2A ZIC2 RXRB GABPA SCRT2 RBM22 PCBP1 HNRNPH1 MCCD1 RPL15P4 lnc-MCCD1-1 DDX39B DHX16 MDC1 LY6G5B ATF6B MICA SKIV2L
GH06J031531 Promoter 0.7 EPDnew 600.7 +0.6 572 0.1 ZNF600 ZBTB44 HMBOX1 ZNF10 ZBTB17 NRF1 ZNF324 ZNF660 HLF XRCC5 MCCD1 RPL15P4 lnc-MCCD1-1 MICB MG828730-062
GH06J031567 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11 +50.3 50347 22.2 SP1 HNRNPL GATAD2A CTCF PRDM10 ZNF629 TFE3 ZNF512 IKZF1 ZNF692 TNF ATP6V1G2 LST1 AB675034 LTB lnc-TNF-1 LTA DDX39B LY6G5B MICB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL15P4 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL15P4 Gene

Genomic Locations for RPL15P4 Gene
chr6:31,528,072-31,528,721
(GRCh38/hg38)
Size:
650 bases
Orientation:
Plus strand
chr6:31,495,853-31,496,498
(GRCh37/hg19)
Size:
646 bases
Orientation:
Plus strand

Genomic View for RPL15P4 Gene

Genes around RPL15P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL15P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL15P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for RPL15P4 Gene

Post-translational modifications for RPL15P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL15P4 Gene

Domains & Families for RPL15P4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL15P4 Gene

Function for RPL15P4 Gene

Phenotypes From GWAS Catalog for RPL15P4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL15P4 Gene

Localization for RPL15P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL15P4 Gene

Pathways & Interactions for RPL15P4 Gene

PathCards logo

SuperPathways for RPL15P4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL15P4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL15P4 Gene

Drugs & Compounds for RPL15P4 Gene

No Compound Related Data Available

Transcripts for RPL15P4 Gene

mRNA/cDNA for RPL15P4 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL15P4 Gene

No ASD Table

Relevant External Links for RPL15P4 Gene

GeneLoc Exon Structure for
RPL15P4

Expression for RPL15P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL15P4 Gene

genes like me logo Genes that share expression patterns with RPL15P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL15P4 Gene

Orthologs for RPL15P4 Gene

Evolution for RPL15P4 Gene

ENSEMBL:
Gene Tree for RPL15P4 (if available)
TreeFam:
Gene Tree for RPL15P4 (if available)

No data available for Orthologs for RPL15P4 Gene

Paralogs for RPL15P4 Gene

No data available for Paralogs for RPL15P4 Gene

Variants for RPL15P4 Gene

Additional Variant Information for RPL15P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL15P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL15P4 Gene

Disorders for RPL15P4 Gene

No disorders were found for RPL15P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL15P4 Gene

Publications for RPL15P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

Products for RPL15P4 Gene

Sources for RPL15P4 Gene