Aliases for RPL15P4 Gene

Aliases for RPL15P4 Gene

  • Ribosomal Protein L15 Pseudogene 4 2 3 5
  • Em:AC006046.2 3
  • RPL15_4_680 3

External Ids for RPL15P4 Gene

Previous GeneCards Identifiers for RPL15P4 Gene

  • GC00U914413
  • GC06U900678
  • GC06P031608
  • GC06P031610
  • GC06P031497
  • GC06P031498
  • GC06P031282
  • GC06Pi31508
  • GC06P031499
  • GC06P031529
  • GC06P031530
  • GC06P032307
  • GC06P032495
  • GC06P031531
  • GC06P031532
  • GC06P031533
  • GC06P031534
  • GC06P031537
  • GC06P031987
  • GC06P032137
  • GC06P032140

Summaries for RPL15P4 Gene

GeneCards Summary for RPL15P4 Gene

RPL15P4 (Ribosomal Protein L15 Pseudogene 4) is a Pseudogene.

Additional gene information for RPL15P4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL15P4 Gene

Genomics for RPL15P4 Gene

GeneHancer (GH) Regulatory Elements for RPL15P4 Gene

Promoters and enhancers for RPL15P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J031526 Enhancer 0.9 Ensembl ENCODE 750.6 -1.8 -1775 2.6 SMARCE1 L3MBTL2 DACH1 ZFX SP7 SMARCA4 IKZF1 DPF2 REST ZEB2 RPL15P4 lnc-MCCD1-1 MICB DDX39B ENSG00000272221 LSM2 HCG22 HCG23 PPIAP9 MG828730-062
GH06J031528 Promoter 0.7 EPDnew 750.6 +0.9 867 0.1 ZIC2 NFKBIZ ZNF585B SCRT2 REST POLR2A TFDP1 ZNF423 KLF9 SUPT5H MCCD1 RPL15P4 lnc-MCCD1-1 ZBTB12 PRR3 DXO GTF2H4 MG828730-062
GH06J031529 Enhancer 0.7 ENCODE 750.6 +1.4 1443 0.3 MIXL1 ZNF652 POLR2A HNF1A ZIC2 GATAD2A RXRB ZEB2 NFKBIZ SCRT2 MCCD1 RPL15P4 lnc-MCCD1-1 ENSG00000272221 HCG23 HLA-C piR-49813 MG828730-062
GH06J031531 Promoter 0.6 EPDnew 750.6 +0.6 568 0.1 HLF ZNF10 ZBTB17 NRF1 ZNF324 MCCD1 RPL15P4 lnc-MCCD1-1 MG828730-062
GH06J031567 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11 +50.3 50343 22.2 GTF3C2 ZNF24 SP1 CTCF RBPJ POLR2A TRIM22 MYC ETV6 RELA TNF ATP6V1G2 LST1 AB675034 LTB lnc-TNF-1 LTA DDX39B LY6G5B ATF6B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL15P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL15P4 Gene

Genomic Locations for RPL15P4 Gene
chr6:31,528,076-31,528,721
(GRCh38/hg38)
Size:
646 bases
Orientation:
Plus strand
chr6:31,495,853-31,496,498
(GRCh37/hg19)
Size:
646 bases
Orientation:
Plus strand

Genomic View for RPL15P4 Gene

Genes around RPL15P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL15P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL15P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for RPL15P4 Gene

Post-translational modifications for RPL15P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL15P4 Gene

Domains & Families for RPL15P4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL15P4 Gene

Function for RPL15P4 Gene

Phenotypes From GWAS Catalog for RPL15P4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL15P4 Gene

Localization for RPL15P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL15P4 Gene

Pathways & Interactions for RPL15P4 Gene

PathCards logo

SuperPathways for RPL15P4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL15P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL15P4 Gene

Drugs & Compounds for RPL15P4 Gene

No Compound Related Data Available

Transcripts for RPL15P4 Gene

mRNA/cDNA for RPL15P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL15P4 Gene

No ASD Table

Relevant External Links for RPL15P4 Gene

GeneLoc Exon Structure for
RPL15P4
ECgene alternative splicing isoforms for
RPL15P4

Expression for RPL15P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL15P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL15P4 Gene:

RPL15P4
genes like me logo Genes that share expression patterns with RPL15P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL15P4 Gene

Orthologs for RPL15P4 Gene

Evolution for RPL15P4 Gene

ENSEMBL:
Gene Tree for RPL15P4 (if available)
TreeFam:
Gene Tree for RPL15P4 (if available)

No data available for Orthologs for RPL15P4 Gene

Paralogs for RPL15P4 Gene

No data available for Paralogs for RPL15P4 Gene

Variants for RPL15P4 Gene

Additional Variant Information for RPL15P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL15P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL15P4 Gene

Disorders for RPL15P4 Gene

No disorders were found for RPL15P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL15P4 Gene

Publications for RPL15P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 56

Products for RPL15P4 Gene

Sources for RPL15P4 Gene