Aliases for RPL15P20 Gene

Aliases for RPL15P20 Gene

  • Ribosomal Protein L15 Pseudogene 20 2 3 5
  • RPL15_7_1476 3
  • RPL15P20 5

External Ids for RPL15P20 Gene

Previous GeneCards Identifiers for RPL15P20 Gene

  • GC16M015934
  • GC16M015935
  • GC16M016026

Summaries for RPL15P20 Gene

GeneCards Summary for RPL15P20 Gene

RPL15P20 (Ribosomal Protein L15 Pseudogene 20) is a Pseudogene.

Additional gene information for RPL15P20 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL15P20 Gene

Genomics for RPL15P20 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL15P20 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J015932 Enhancer 0.4 Ensembl 600.7 -1.3 -1259 2 FOXA2 CUX1 MEIS2 RPL15P20 piR-57133-222 ABCC1 LOC107984869 CEP20
GH16J015933 Promoter 0.3 Ensembl 600.7 +0.1 141 0.4 RPL15P20 piR-57133-222 ABCC1 LOC107984869 piR-48759-107 CEP20
GH16J015928 Enhancer 0.8 Ensembl 0.7 +3.5 3542 0.8 GATAD2A TFE3 RCOR2 RXRB IRF2 CEBPA SOX13 CEBPB TCF7 ZBTB26 ABCC1 RPL15P20 LOC107984869 piR-48759-107 CEP20
GH16J015919 Enhancer 0.6 Ensembl ENCODE 0.4 +12.0 12008 1.8 JUND JUN FOSL2 RPL15P20 piR-48759-107 LOC107984869 ABCC1 CEP20
GH16J015912 Enhancer 0.5 Ensembl 0.4 +19.4 19441 1 ZNF512 RFX1 MTA1 ZNF366 ZBTB33 GABPB1 CEP20 piR-48759-107 RPL15P20 LOC107984869 ABCC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL15P20 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL15P20 Gene

Genomic Locations for RPL15P20 Gene
chr16:15,931,646-15,932,342
(GRCh38/hg38)
Size:
697 bases
Orientation:
Minus strand
chr16:16,025,554-16,026,186
(GRCh37/hg19)
Size:
633 bases
Orientation:
Minus strand

Genomic View for RPL15P20 Gene

Genes around RPL15P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL15P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL15P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL15P20 Gene

Proteins for RPL15P20 Gene

Post-translational modifications for RPL15P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL15P20 Gene

Domains & Families for RPL15P20 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL15P20 Gene

Function for RPL15P20 Gene

Phenotypes From GWAS Catalog for RPL15P20 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL15P20 Gene

Localization for RPL15P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL15P20 Gene

Pathways & Interactions for RPL15P20 Gene

PathCards logo

SuperPathways for RPL15P20 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL15P20 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL15P20 Gene

Drugs & Compounds for RPL15P20 Gene

No Compound Related Data Available

Transcripts for RPL15P20 Gene

mRNA/cDNA for RPL15P20 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL15P20 Gene

No ASD Table

Relevant External Links for RPL15P20 Gene

GeneLoc Exon Structure for
RPL15P20

Expression for RPL15P20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL15P20 Gene

Protein differential expression in normal tissues from HIPED for RPL15P20 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for RPL15P20 Gene



Protein tissue co-expression partners for RPL15P20 Gene

genes like me logo Genes that share expression patterns with RPL15P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL15P20 Gene

Orthologs for RPL15P20 Gene

Evolution for RPL15P20 Gene

ENSEMBL:
Gene Tree for RPL15P20 (if available)
TreeFam:
Gene Tree for RPL15P20 (if available)

No data available for Orthologs for RPL15P20 Gene

Paralogs for RPL15P20 Gene

No data available for Paralogs for RPL15P20 Gene

Variants for RPL15P20 Gene

Additional Variant Information for RPL15P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL15P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL15P20 Gene

Disorders for RPL15P20 Gene

No disorders were found for RPL15P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL15P20 Gene

Publications for RPL15P20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

Products for RPL15P20 Gene

Sources for RPL15P20 Gene