Aliases for RPL15P2 Gene

Aliases for RPL15P2 Gene

  • Ribosomal Protein L15 Pseudogene 2 2 3 5
  • RPL15_6_1404 3
  • RPL15P2 5

External Ids for RPL15P2 Gene

Previous GeneCards Identifiers for RPL15P2 Gene

  • GC14U900041
  • GC14M093255
  • GC14M094335
  • GC14M095265

Summaries for RPL15P2 Gene

GeneCards Summary for RPL15P2 Gene

RPL15P2 (Ribosomal Protein L15 Pseudogene 2) is a Pseudogene.

Additional gene information for RPL15P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL15P2 Gene

Genomics for RPL15P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL15P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J094801 Promoter 0.6 Ensembl 250.7 +0.2 214 0.6 CTCF ATF2 CREB1 ATF7 RPL15P2 lnc-GSC-1 lnc-SERPINA3-4 GSC DICER1
GH14J094805 Enhancer 0.4 ENCODE 0.7 -4.5 -4544 0.2 PRDM6 ZBTB48 GLIS1 PRDM1 RPL15P2 lnc-SERPINA3-4 LOC107984693 GSC DICER1
GH14J094824 Enhancer 0.8 Ensembl ENCODE 0.3 -22.6 -22628 0.5 MAFF ZNF316 CTCF JUND NFE2 NFE2L2 MAFG MAFK FOSL2 MNT LOC107984693 RPL15P2 lnc-SERPINA3-4 GSC DICER1
GH14J094827 Enhancer 0.2 ENCODE 0.3 -26.4 -26374 0.2 LOC107984693 RPL15P2 GSC DICER1
GH14J094828 Enhancer 0.2 ENCODE 0.3 -26.8 -26765 0.5 LOC107984693 RPL15P2 GSC DICER1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL15P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL15P2 Gene

Latest Assembly
chr14:94,799,382-94,801,515
(GRCh38/hg38)
Size:
2,134 bases
Orientation:
Minus strand

Previous Assembly
chr14:95,265,719-95,267,852
(GRCh37/hg19 by Entrez Gene)
Size:
2,134 bases
Orientation:
Minus strand

chr14:95,267,186-95,267,800
(GRCh37/hg19 by Ensembl)
Size:
615 bases
Orientation:
Minus strand

Genomic View for RPL15P2 Gene

Genes around RPL15P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL15P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL15P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL15P2 Gene

Proteins for RPL15P2 Gene

Post-translational modifications for RPL15P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL15P2 Gene

Domains & Families for RPL15P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL15P2 Gene

Function for RPL15P2 Gene

Phenotypes From GWAS Catalog for RPL15P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL15P2 Gene

Localization for RPL15P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL15P2 Gene

Pathways & Interactions for RPL15P2 Gene

PathCards logo

SuperPathways for RPL15P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL15P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL15P2 Gene

Drugs & Compounds for RPL15P2 Gene

No Compound Related Data Available

Transcripts for RPL15P2 Gene

mRNA/cDNA for RPL15P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL15P2 Gene

No ASD Table

Relevant External Links for RPL15P2 Gene

GeneLoc Exon Structure for
RPL15P2

Expression for RPL15P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL15P2 Gene

mRNA differential expression in normal tissues according to GTEx for RPL15P2 Gene

This gene is overexpressed in Heart - Left Ventricle (x4.4) and Whole Blood (x4.0).
genes like me logo Genes that share expression patterns with RPL15P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL15P2 Gene

Orthologs for RPL15P2 Gene

Evolution for RPL15P2 Gene

ENSEMBL:
Gene Tree for RPL15P2 (if available)
TreeFam:
Gene Tree for RPL15P2 (if available)

No data available for Orthologs for RPL15P2 Gene

Paralogs for RPL15P2 Gene

No data available for Paralogs for RPL15P2 Gene

Variants for RPL15P2 Gene

Additional Variant Information for RPL15P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL15P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL15P2 Gene

Disorders for RPL15P2 Gene

Additional Disease Information for RPL15P2

Genetic Association Database
(GAD)

No disorders were found for RPL15P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL15P2 Gene

Publications for RPL15P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Gene-environment interactions and obesity traits among postmenopausal African-American and Hispanic women in the Women's Health Initiative SHARe Study. (PMID: 23192594) Velez Edwards DR … Edwards TL (Human genetics 2013) 3
  3. A genome-wide association study identifies a novel major locus for glycemic control in type 1 diabetes, as measured by both A1C and glucose. (PMID: 19875614) Paterson AD … Diabetes Control and Complications Trial/Epidemiology of Diabetes Interventions and Complications Research Group (Diabetes 2010) 41
  4. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 41
  5. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 41

Products for RPL15P2 Gene

Sources for RPL15P2 Gene