Aliases for RPL13AP8 Gene

Aliases for RPL13AP8 Gene

  • Ribosomal Protein L13a Pseudogene 8 2 3
  • RPL13A_2_157 3

External Ids for RPL13AP8 Gene

Previous GeneCards Identifiers for RPL13AP8 Gene

  • GC01P205148
  • GC01P207082

Summaries for RPL13AP8 Gene

GeneCards Summary for RPL13AP8 Gene

RPL13AP8 (Ribosomal Protein L13a Pseudogene 8) is a Pseudogene.

Additional gene information for RPL13AP8 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL13AP8 Gene

Genomics for RPL13AP8 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL13AP8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J206907 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 600.7 +1.6 1649 2.5 PRDM10 ZNF692 PRDM1 MTA2 RFX1 ZIC2 PKNOX1 PATZ1 REST SP1 ENSG00000226945 RPL13AP8 piR-46238-001 ENSG00000271680 CDCA4P4 PIGR IL20 FCAMR EIF2D IL19
GH01J206904 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 600.7 -1.5 -1542 3.3 CTCF POLR2A JUND PRDM1 REST HDAC1 SP1 UBTF MTA3 CTBP1 ENSG00000271680 ENSG00000226945 RPL13AP8 lnc-IL24-1 piR-46238-001 IL20 PIGR FCAMR FCMR IL19
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL13AP8 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL13AP8 Gene

Genomic Locations for RPL13AP8 Gene
chr1:206,907,598-206,908,728
(GRCh38/hg38)
Size:
1,131 bases
Orientation:
Plus strand
chr1:207,080,943-207,082,080
(GRCh37/hg19)
Size:
1,138 bases
Orientation:
Plus strand

Genomic View for RPL13AP8 Gene

Genes around RPL13AP8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13AP8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13AP8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13AP8 Gene

Proteins for RPL13AP8 Gene

Post-translational modifications for RPL13AP8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13AP8 Gene

Domains & Families for RPL13AP8 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL13AP8 Gene

Function for RPL13AP8 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13AP8 Gene

Localization for RPL13AP8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL13AP8 Gene

Pathways & Interactions for RPL13AP8 Gene

PathCards logo

SuperPathways for RPL13AP8 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL13AP8 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL13AP8 Gene

Drugs & Compounds for RPL13AP8 Gene

No Compound Related Data Available

Transcripts for RPL13AP8 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13AP8 Gene

No ASD Table

Relevant External Links for RPL13AP8 Gene

GeneLoc Exon Structure for
RPL13AP8

No data available for mRNA/cDNA for RPL13AP8 Gene

Expression for RPL13AP8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL13AP8 Gene

mRNA differential expression in normal tissues according to GTEx for RPL13AP8 Gene

This gene is overexpressed in Whole Blood (x10.6), Small Intestine - Terminal Ileum (x10.5), and Spleen (x10.4).
genes like me logo Genes that share expression patterns with RPL13AP8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL13AP8 Gene

Orthologs for RPL13AP8 Gene

No data available for Orthologs and Evolution for RPL13AP8 Gene

Paralogs for RPL13AP8 Gene

No data available for Paralogs for RPL13AP8 Gene

Variants for RPL13AP8 Gene

Additional Variant Information for RPL13AP8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13AP8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13AP8 Gene

Disorders for RPL13AP8 Gene

No disorders were found for RPL13AP8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL13AP8 Gene

Publications for RPL13AP8 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL13AP8 Gene

Products for RPL13AP8 Gene

Sources for RPL13AP8 Gene