Aliases for RPL13AP19 Gene

Aliases for RPL13AP19 Gene

  • Ribosomal Protein L13a Pseudogene 19 2 3 5
  • RPL13A_6_1040 3
  • RPL13AP19 5

External Ids for RPL13AP19 Gene

Previous GeneCards Identifiers for RPL13AP19 Gene

  • GC10M049626
  • GC10M049954

Summaries for RPL13AP19 Gene

GeneCards Summary for RPL13AP19 Gene

RPL13AP19 (Ribosomal Protein L13a Pseudogene 19) is a Pseudogene.

Additional gene information for RPL13AP19 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL13AP19 Gene

Genomics for RPL13AP19 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL13AP19 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J048742 Enhancer 0.7 dbSUPER 600.7 +1.9 1948 2.5 IKZF2 TRIM22 NRF1 RELB RUNX3 GATAD2B FOXA2 ARNT IKZF1 JUNB RPL13AP19 WDFY4 LRRC18
GH10J048748 Enhancer 0.8 Ensembl ENCODE 0.7 -2.6 -2648 2.8 PHB2 IKZF2 MNT EED HES1 FOXK2 RELB RUNX3 GATAD2B BCL11A WDFY4 RPL13AP19 MN309167 LRRC18
GH10J048683 Promoter/Enhancer 1.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 +60.8 60757 4 SP1 POLR2A BACH1 LARP7 ZNF143 SMAD5 TCF12 IKZF2 RCOR1 TRIM22 WDFY4 ENSG00000236800 RPL13AP19 LRRC18
GH10J048759 Enhancer 0.7 FANTOM5 0.4 -13.1 -13094 0.1 IKZF2 EED YBX1 DPF2 RELB RUNX3 POLR2A BCL11A ARNT ELF1 WDFY4 ARHGAP22 TMEM273 RPL13AP19 MN309167 LRRC18
GH10J048760 Enhancer 0.7 FANTOM5 0.4 -13.5 -13541 0.3 IKZF2 RCOR1 RELA EED YBX1 DPF2 RELB ARNT NBN IKZF1 ARHGAP22 TMEM273 RPL13AP19 MN309167 WDFY4 LRRC18
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL13AP19 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL13AP19 Gene

Genomic Locations for RPL13AP19 Gene
chr10:48,745,520-48,746,152
(GRCh38/hg38)
Size:
633 bases
Orientation:
Minus strand
chr10:49,953,247-49,960,153
(GRCh37/hg19)
Size:
6,907 bases
Orientation:
Minus strand

Genomic View for RPL13AP19 Gene

Genes around RPL13AP19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13AP19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13AP19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13AP19 Gene

Proteins for RPL13AP19 Gene

Post-translational modifications for RPL13AP19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13AP19 Gene

Domains & Families for RPL13AP19 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL13AP19 Gene

Function for RPL13AP19 Gene

Phenotypes From GWAS Catalog for RPL13AP19 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13AP19 Gene

Localization for RPL13AP19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL13AP19 Gene

Pathways & Interactions for RPL13AP19 Gene

PathCards logo

SuperPathways for RPL13AP19 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL13AP19 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL13AP19 Gene

Drugs & Compounds for RPL13AP19 Gene

No Compound Related Data Available

Transcripts for RPL13AP19 Gene

mRNA/cDNA for RPL13AP19 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13AP19 Gene

No ASD Table

Relevant External Links for RPL13AP19 Gene

GeneLoc Exon Structure for
RPL13AP19

Expression for RPL13AP19 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL13AP19 Gene

mRNA differential expression in normal tissues according to GTEx for RPL13AP19 Gene

This gene is overexpressed in Whole Blood (x6.8).
genes like me logo Genes that share expression patterns with RPL13AP19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL13AP19 Gene

Orthologs for RPL13AP19 Gene

Evolution for RPL13AP19 Gene

ENSEMBL:
Gene Tree for RPL13AP19 (if available)
TreeFam:
Gene Tree for RPL13AP19 (if available)

No data available for Orthologs for RPL13AP19 Gene

Paralogs for RPL13AP19 Gene

No data available for Paralogs for RPL13AP19 Gene

Variants for RPL13AP19 Gene

Additional Variant Information for RPL13AP19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13AP19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13AP19 Gene

Disorders for RPL13AP19 Gene

No disorders were found for RPL13AP19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL13AP19 Gene

Publications for RPL13AP19 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

Products for RPL13AP19 Gene

Sources for RPL13AP19 Gene