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Aliases for RPL13AP13 Gene

Aliases for RPL13AP13 Gene

  • Ribosomal Protein L13a Pseudogene 13 2 3
  • RPL13A_4_562 3
  • AC026477.1 5

External Ids for RPL13AP13 Gene

Previous GeneCards Identifiers for RPL13AP13 Gene

  • GC05P052539

Summaries for RPL13AP13 Gene

GeneCards Summary for RPL13AP13 Gene

RPL13AP13 (Ribosomal Protein L13a Pseudogene 13) is a Pseudogene.

Additional gene information for RPL13AP13 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13AP13 Gene

Genomics for RPL13AP13 Gene

GeneHancer (GH) Regulatory Elements for RPL13AP13 Gene

Promoters and enhancers for RPL13AP13 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I053248 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +43.2 43186 1.7 JUND POLR2A FOSL2 FOS LOC257396 FST ITGA2 RPL13AP13 LOC105378965
GH05I053244 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +40.1 40142 3.9 MEIS2 MTA2 TEAD4 TAL1 CBFA2T3 DPF2 TCF12 JUND POLR2A NCOR1 LOC257396 RPL13AP13 LOC105378965
GH05I053252 Enhancer 0.9 ENCODE dbSUPER 0.2 +47.1 47085 1.6 TEAD4 TAL1 FEZF1 FOSL1 TCF12 ZNF335 GATA3 CTBP1 ZNF766 GATA2 LOC257396 RPL13AP13 LOC105378965
GH05I053210 Enhancer 0.4 ENCODE 0.4 +5.2 5209 1.7 FOSL1 SRF LOC257396 RPL13AP13 LOC105378965
GH05I053256 Enhancer 0.7 ENCODE dbSUPER 0.2 +51.0 51030 2.6 FOSL1 JUND CBFA2T3 FOS LOC257396 RPL13AP13 LOC105378965
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL13AP13 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL13AP13 Gene

Genomic Locations for RPL13AP13 Gene
chr5:53,206,561-53,207,178
(GRCh38/hg38)
Size:
618 bases
Orientation:
Plus strand
chr5:52,502,391-52,503,008
(GRCh37/hg19)

Genomic View for RPL13AP13 Gene

Genes around RPL13AP13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13AP13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13AP13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13AP13 Gene

Proteins for RPL13AP13 Gene

Post-translational modifications for RPL13AP13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13AP13 Gene

Domains & Families for RPL13AP13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13AP13 Gene

Function for RPL13AP13 Gene

Phenotypes From GWAS Catalog for RPL13AP13 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13AP13 Gene

Localization for RPL13AP13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL13AP13 Gene

Pathways & Interactions for RPL13AP13 Gene

SuperPathways for RPL13AP13 Gene

No Data Available

Interacting Proteins for RPL13AP13 Gene

Gene Ontology (GO) - Biological Process for RPL13AP13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13AP13 Gene

Drugs & Compounds for RPL13AP13 Gene

No Compound Related Data Available

Transcripts for RPL13AP13 Gene

mRNA/cDNA for RPL13AP13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13AP13 Gene

No ASD Table

Relevant External Links for RPL13AP13 Gene

GeneLoc Exon Structure for
RPL13AP13
ECgene alternative splicing isoforms for
RPL13AP13

Expression for RPL13AP13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL13AP13 Gene

mRNA differential expression in normal tissues according to GTEx for RPL13AP13 Gene

This gene is overexpressed in Adrenal Gland (x36.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL13AP13 Gene:

RPL13AP13
genes like me logo Genes that share expression patterns with RPL13AP13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL13AP13 Gene

Orthologs for RPL13AP13 Gene

Evolution for RPL13AP13 Gene

ENSEMBL:
Gene Tree for RPL13AP13 (if available)
TreeFam:
Gene Tree for RPL13AP13 (if available)

No data available for Orthologs for RPL13AP13 Gene

Paralogs for RPL13AP13 Gene

No data available for Paralogs for RPL13AP13 Gene

Variants for RPL13AP13 Gene

Additional Variant Information for RPL13AP13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13AP13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13AP13 Gene

Disorders for RPL13AP13 Gene

No disorders were found for RPL13AP13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL13AP13 Gene

Publications for RPL13AP13 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL13AP13 Gene

Sources for RPL13AP13 Gene

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