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Aliases for RPL13AP10 Gene

Aliases for RPL13AP10 Gene

  • Ribosomal Protein L13a Pseudogene 10 2 3
  • RPL13A_2_89 3
  • AL591742.1 5

External Ids for RPL13AP10 Gene

Previous GeneCards Identifiers for RPL13AP10 Gene

  • GC01M114348
  • GC01M114545

Summaries for RPL13AP10 Gene

GeneCards Summary for RPL13AP10 Gene

RPL13AP10 (Ribosomal Protein L13a Pseudogene 10) is a Pseudogene.

Additional gene information for RPL13AP10 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13AP10 Gene

Genomics for RPL13AP10 Gene

GeneHancer (GH) Regulatory Elements for RPL13AP10 Gene

Promoters and enhancers for RPL13AP10 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I114002 Enhancer 0.4 ENCODE dbSUPER 550.8 +0.3 337 1.2 RPL13AP10 SYT6 AP4B1 OLFML3
GH01I113978 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.3 +21.5 21451 7.3 MLX ARID4B DMAP1 ZNF48 ARID2 ZNF143 DEK SP5 JUNB REST TRIM33 OLFML3 LRIG2 SIKE1 LOC100421402 SYT6 DCLRE1B RPL13AP10
GH01I113990 Enhancer 0.9 dbSUPER 0.4 +12.2 12208 1.5 PKNOX1 ZNF529 INSM2 ZNF76 FEZF1 ZNF2 ZNF121 ZNF213 ZNF366 ZSCAN5C LRIG2 LOC100421402 TRIM33 RSBN1 OLFML3 SIKE1 LOC100996251 DCLRE1B RPL13AP10
GH01I114023 Enhancer 0.8 ENCODE dbSUPER 0.3 -20.8 -20802 1.3 ZNF740 ZNF449 REST ZNF501 ZIC2 GABPA KLF16 GABPB1 PRDM10 ZBTB20 ENSG00000282048 RPL13AP10 OLFML3
GH01I114015 Enhancer 0.5 ENCODE 0.4 -11.9 -11921 0 SP1 ESRRA JUND FOSL2 FOS RPL13AP10 ENSG00000282048 OLFML3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL13AP10 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL13AP10 Gene

Genomic Locations for RPL13AP10 Gene
chr1:114,001,433-114,003,343
(GRCh38/hg38)
Size:
1,911 bases
Orientation:
Minus strand
chr1:114,544,055-114,545,965
(GRCh37/hg19)

Genomic View for RPL13AP10 Gene

Genes around RPL13AP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13AP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13AP10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13AP10 Gene

Proteins for RPL13AP10 Gene

Post-translational modifications for RPL13AP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13AP10 Gene

Domains & Families for RPL13AP10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13AP10 Gene

Function for RPL13AP10 Gene

Phenotypes From GWAS Catalog for RPL13AP10 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13AP10 Gene

Localization for RPL13AP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL13AP10 Gene

Pathways & Interactions for RPL13AP10 Gene

SuperPathways for RPL13AP10 Gene

No Data Available

Interacting Proteins for RPL13AP10 Gene

Gene Ontology (GO) - Biological Process for RPL13AP10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13AP10 Gene

Drugs & Compounds for RPL13AP10 Gene

No Compound Related Data Available

Transcripts for RPL13AP10 Gene

mRNA/cDNA for RPL13AP10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13AP10 Gene

No ASD Table

Relevant External Links for RPL13AP10 Gene

GeneLoc Exon Structure for
RPL13AP10
ECgene alternative splicing isoforms for
RPL13AP10

Expression for RPL13AP10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL13AP10 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL13AP10 Gene:

RPL13AP10
genes like me logo Genes that share expression patterns with RPL13AP10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL13AP10 Gene

Orthologs for RPL13AP10 Gene

Evolution for RPL13AP10 Gene

ENSEMBL:
Gene Tree for RPL13AP10 (if available)
TreeFam:
Gene Tree for RPL13AP10 (if available)

No data available for Orthologs for RPL13AP10 Gene

Paralogs for RPL13AP10 Gene

No data available for Paralogs for RPL13AP10 Gene

Variants for RPL13AP10 Gene

Additional Variant Information for RPL13AP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13AP10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13AP10 Gene

Disorders for RPL13AP10 Gene

No disorders were found for RPL13AP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL13AP10 Gene

Publications for RPL13AP10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL13AP10 Gene

Sources for RPL13AP10 Gene

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