RPL12P49 Gene (Pseudogene)

Ribosomal Protein L12 Pseudogene 49

GC0XP016803
GIFtS:
5
See more...

Aliases for RPL12P49 Gene

Aliases for RPL12P49 Gene

  • Ribosomal Protein L12 Pseudogene 49 2 3 5
  • RPL12P49 5

External Ids for RPL12P49 Gene

Previous GeneCards Identifiers for RPL12P49 Gene

  • GC00U936594

Summaries for RPL12P49 Gene

GeneCards Summary for RPL12P49 Gene

RPL12P49 (Ribosomal Protein L12 Pseudogene 49) is a Pseudogene.

Additional gene information for RPL12P49 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL12P49 Gene

Genomics for RPL12P49 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RPL12P49 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH0XJ016804 Enhancer 0.3 Ensembl 600.7 +2.0 1981 0.4 KLF1 RPL12P49 piR-43105-685 RBBP7 TXLNG
GH0XJ016785 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.4 -16.5 -16532 3 SP1 CREB1 PRDM10 ZNF629 SIX5 IKZF1 ZNF692 POLR2A PRDM1 ZNF143 TXLNG RBBP7 RPL12P49
GH0XJ016788 Promoter 0.7 Ensembl 0.4 -14.3 -14332 1 SCRT1 ATF4 CEBPB ATF3 PRDM6 ZNF384 CEBPG RBBP7 TXLNG RPL12P49
GH0XJ016790 Enhancer 0.5 Ensembl 0.4 -12.0 -12032 2 ATF4 ZNF664 POLR2A CEBPB ZNF652 RBBP7 RNU7-56P TXLNG RPL12P49
GH0XJ016797 Enhancer 0.3 Ensembl ENCODE 0.4 -5.4 -5432 3.2 RBBP7 RPL12P49 TXLNG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL12P49 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL12P49 Gene

Genomic Locations for RPL12P49 Gene
chrX:16,803,233-16,803,353
(GRCh38/hg38)
Size:
121 bases
Orientation:
Plus strand
chrX:16,821,356-16,821,476
(GRCh37/hg19)
Size:
121 bases
Orientation:
Plus strand

Genomic View for RPL12P49 Gene

Genes around RPL12P49 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P49 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P49 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL12P49 Gene

Proteins for RPL12P49 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL12P49 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P49 Gene

Domains & Families for RPL12P49 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL12P49 Gene

Function for RPL12P49 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P49 Gene

Localization for RPL12P49 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P49 Gene

Pathways & Interactions for RPL12P49 Gene

PathCards logo

SuperPathways for RPL12P49 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL12P49 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL12P49 Gene

Drugs & Compounds for RPL12P49 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL12P49 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPL12P49 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P49 Gene

No ASD Table

Relevant External Links for RPL12P49 Gene

GeneLoc Exon Structure for
RPL12P49

Expression for RPL12P49 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P49 Gene

Orthologs for RPL12P49 Gene

Evolution for RPL12P49 Gene

ENSEMBL:
Gene Tree for RPL12P49 (if available)
TreeFam:
Gene Tree for RPL12P49 (if available)

No data available for Orthologs for RPL12P49 Gene

Paralogs for RPL12P49 Gene

No data available for Paralogs for RPL12P49 Gene

Variants for RPL12P49 Gene

Additional Variant Information for RPL12P49 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P49

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P49 Gene

Disorders for RPL12P49 Gene

No disorders were found for RPL12P49 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL12P49 Gene

Publications for RPL12P49 Gene

No publications were found for RPL12P49 Gene.

No data available for Mastermind for RPL12P49 Gene

Products for RPL12P49 Gene

Sources for RPL12P49 Gene