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Aliases for RPL12P42 Gene

Aliases for RPL12P42 Gene

  • Ribosomal Protein L12 Pseudogene 42 2 3 5
  • RPL12_15_1630 3

External Ids for RPL12P42 Gene

Previous GeneCards Identifiers for RPL12P42 Gene

  • GC19M013134
  • GC19M013269

Summaries for RPL12P42 Gene

GeneCards Summary for RPL12P42 Gene

RPL12P42 (Ribosomal Protein L12 Pseudogene 42) is a Pseudogene.

Additional gene information for RPL12P42 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P42 Gene

Genomics for RPL12P42 Gene

GeneHancer (GH) Regulatory Elements for RPL12P42 Gene

Promoters and enhancers for RPL12P42 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I012994 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 5.2 +161.9 161926 4.3 HDGF CLOCK ARID4B SIN3A GLI4 ZNF2 SP3 YY2 GMEB1 SMARCA4 GC19M012993 NFIX ZNF20 RNASEH2A DCAF15 TRMT1 ZNF136 ZNF44 RPL28P5 ZNF799
GH19I013000 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 4.4 +156.9 156934 3.4 HIC1 BCOR ZNF366 ZFP36 ZMYM3 KDM1A ZFX ZBTB17 MAST1 GCDH MAN2B1 RPL12P42 STX10 TNPO2 ZNF490 NFIX GC19M012993 ENSG00000267417
GH19I013148 Promoter/Enhancer 2.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.2 5179 10.2 MLX DMAP1 YBX1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 STX10 ENSG00000267598 IER2 CCDC130 ZNF136 ZNF44 TRMT1 ZNF709 ZNF564 ZNF791
GH19I013160 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -8.4 -8421 13.8 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 ZNF143 ZNF263 SP3 CCDC130 ZNF799 ZNF44 ZNF791 TRIR ZNF564 WDR83OS ZNF442 TRMT1 DCAF15
GH19I013181 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -23.2 -23186 1 PKNOX1 MAX ZNF384 EBF1 KLF5 ZFHX2 POLR2A EGR1 VEZF1 ATF7 IER2 STX10 GC19P013200 RPL12P42
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL12P42 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL12P42 Gene

Genomic Locations for RPL12P42 Gene
chr19:13,157,910-13,158,874
(GRCh38/hg38)
Size:
965 bases
Orientation:
Minus strand
chr19:13,268,724-13,269,688
(GRCh37/hg19)

Genomic View for RPL12P42 Gene

Genes around RPL12P42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P42 Gene

Proteins for RPL12P42 Gene

Post-translational modifications for RPL12P42 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P42 Gene

Domains & Families for RPL12P42 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P42 Gene

Function for RPL12P42 Gene

Phenotypes From GWAS Catalog for RPL12P42 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P42 Gene

Localization for RPL12P42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P42 Gene

Pathways & Interactions for RPL12P42 Gene

SuperPathways for RPL12P42 Gene

No Data Available

Interacting Proteins for RPL12P42 Gene

Gene Ontology (GO) - Biological Process for RPL12P42 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P42 Gene

Drugs & Compounds for RPL12P42 Gene

No Compound Related Data Available

Transcripts for RPL12P42 Gene

mRNA/cDNA for RPL12P42 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P42 Gene

No ASD Table

Relevant External Links for RPL12P42 Gene

GeneLoc Exon Structure for
RPL12P42
ECgene alternative splicing isoforms for
RPL12P42

Expression for RPL12P42 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL12P42 Gene

mRNA differential expression in normal tissues according to GTEx for RPL12P42 Gene

This gene is overexpressed in Testis (x4.5) and Whole Blood (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL12P42 Gene:

RPL12P42
genes like me logo Genes that share expression patterns with RPL12P42: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P42 Gene

Orthologs for RPL12P42 Gene

Evolution for RPL12P42 Gene

ENSEMBL:
Gene Tree for RPL12P42 (if available)
TreeFam:
Gene Tree for RPL12P42 (if available)

No data available for Orthologs for RPL12P42 Gene

Paralogs for RPL12P42 Gene

No data available for Paralogs for RPL12P42 Gene

Variants for RPL12P42 Gene

Additional Variant Information for RPL12P42 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P42

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P42 Gene

Disorders for RPL12P42 Gene

No disorders were found for RPL12P42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL12P42 Gene

Publications for RPL12P42 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL12P42 Gene

Sources for RPL12P42 Gene

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