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Aliases for RPL12P40 Gene

Subcategory (RNA class) for RPL12P40 Gene


Aliases for RPL12P40 Gene

  • Ribosomal Protein L12 Pseudogene 40 2 3 5
  • RPL12_19_1596 3

External Ids for RPL12P40 Gene

ORGUL Members for RPL12P40 Gene

Previous GeneCards Identifiers for RPL12P40 Gene

  • GC18U900480
  • GC18P035253

Summaries for RPL12P40 Gene

GeneCards Summary for RPL12P40 Gene

RPL12P40 (Ribosomal Protein L12 Pseudogene 40) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL12P40 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P40 Gene

Genomics for RPL12P40 Gene

GeneHancer (GH) Regulatory Elements for RPL12P40 Gene

Promoters and enhancers for RPL12P40 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I037670 Enhancer 0.6 ENCODE 0.8 -2.3 -2326 0.1 PKNOX1 USF1 ARNT BHLHE40 USF2 PBX2 FOS ZFX RPL12P40 MIR4318
GH18I037668 Enhancer 0.5 ENCODE 0.8 -3.4 -3449 1.1 RFX1 POLR2A MAFG NFE2 RPL12P40 MIR4318
GH18I037657 Enhancer 0.2 ENCODE 0.4 -15.1 -15056 0.2 MIR4318 CELF4 RPL12P40
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL12P40 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL12P40 Gene

Genomic Locations for RPL12P40 Gene
488 bases
Plus strand

Genomic View for RPL12P40 Gene

Genes around RPL12P40 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P40 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P40 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P40 Gene

Proteins for RPL12P40 Gene

Post-translational modifications for RPL12P40 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P40 Gene

Domains & Families for RPL12P40 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P40 Gene

Function for RPL12P40 Gene

Phenotypes From GWAS Catalog for RPL12P40 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P40 Gene

Localization for RPL12P40 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P40 Gene

Pathways & Interactions for RPL12P40 Gene

SuperPathways for RPL12P40 Gene

No Data Available

Interacting Proteins for RPL12P40 Gene

Gene Ontology (GO) - Biological Process for RPL12P40 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL12P40 Gene

Drugs & Compounds for RPL12P40 Gene

No Compound Related Data Available

Transcripts for RPL12P40 Gene

mRNA/cDNA for RPL12P40 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P40 Gene

No ASD Table

Relevant External Links for RPL12P40 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL12P40 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL12P40 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL12P40 Gene:

genes like me logo Genes that share expression patterns with RPL12P40: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P40 Gene

Orthologs for RPL12P40 Gene

Evolution for RPL12P40 Gene

Gene Tree for RPL12P40 (if available)
Gene Tree for RPL12P40 (if available)

No data available for Orthologs for RPL12P40 Gene

Paralogs for RPL12P40 Gene

No data available for Paralogs for RPL12P40 Gene

Variants for RPL12P40 Gene

Additional Variant Information for RPL12P40 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P40 Gene

Disorders for RPL12P40 Gene

Additional Disease Information for RPL12P40

Genetic Association Database

No disorders were found for RPL12P40 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL12P40 Gene

Publications for RPL12P40 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 44 58
  3. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin EJ … Vasan RS (BMC medical genetics 2007) 44 58
  4. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 44 58
  5. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 44 58

Products for RPL12P40 Gene

Sources for RPL12P40 Gene

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