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Aliases for RPL12P4 Gene

Aliases for RPL12P4 Gene

  • Ribosomal Protein L12 Pseudogene 4 2 3 5
  • RPL12_23_1714 3
  • DJ800C24.1 3

External Ids for RPL12P4 Gene

Previous GeneCards Identifiers for RPL12P4 Gene

  • GC20U990079
  • GC20P054329
  • GC20P054376
  • GC20P053124
  • GC20P053691
  • GC20P050437

Summaries for RPL12P4 Gene

GeneCards Summary for RPL12P4 Gene

RPL12P4 (Ribosomal Protein L12 Pseudogene 4) is a Pseudogene.

Additional gene information for RPL12P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P4 Gene

Genomics for RPL12P4 Gene

GeneHancer (GH) Regulatory Elements for RPL12P4 Gene

Promoters and enhancers for RPL12P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I055074 Promoter 0.5 Ensembl 550.8 +0.1 145 0.2 RPL12P4 LINC01440
GH20I054207 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.3 -866.1 -866129 2.3 PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 CBX5 PFDN4 RPL12P4 DOK5
GH20I054113 Enhancer 1.4 FANTOM5 Ensembl ENCODE 11.3 -959.5 -959507 3.7 FOXA2 ARID4B ETS1 YY1 ZNF207 ATF7 RXRA SP5 ZHX2 REST CYP24A1 RPL12P4 BCAS1
GH20I055103 Enhancer 0.9 ENCODE 0.3 +28.9 28901 0.2 ATF1 ARNT NCOA2 TCF12 ZNF766 GATA2 CAVIN1 NCOA1 ZNF592 MBD2 RPL12P4 LINC01440
GH20I055173 Enhancer 0.5 ENCODE 0.2 +99.0 98967 0.7 RXRA MAX HNF4A NR2F2 RPL12P4 LINC01440
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL12P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL12P4 Gene

Genomic Locations for RPL12P4 Gene
chr20:55,074,556-55,075,178
(GRCh38/hg38)
Size:
623 bases
Orientation:
Plus strand
chr20:53,691,095-53,691,717
(GRCh37/hg19)

Genomic View for RPL12P4 Gene

Genes around RPL12P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P4 Gene

Proteins for RPL12P4 Gene

Post-translational modifications for RPL12P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P4 Gene

Domains & Families for RPL12P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P4 Gene

Function for RPL12P4 Gene

Phenotypes From GWAS Catalog for RPL12P4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P4 Gene

Localization for RPL12P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P4 Gene

Pathways & Interactions for RPL12P4 Gene

SuperPathways for RPL12P4 Gene

No Data Available

Interacting Proteins for RPL12P4 Gene

Gene Ontology (GO) - Biological Process for RPL12P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P4 Gene

Drugs & Compounds for RPL12P4 Gene

No Compound Related Data Available

Transcripts for RPL12P4 Gene

mRNA/cDNA for RPL12P4 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P4 Gene

No ASD Table

Relevant External Links for RPL12P4 Gene

GeneLoc Exon Structure for
RPL12P4
ECgene alternative splicing isoforms for
RPL12P4

Expression for RPL12P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL12P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL12P4 Gene:

RPL12P4
genes like me logo Genes that share expression patterns with RPL12P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P4 Gene

Orthologs for RPL12P4 Gene

Evolution for RPL12P4 Gene

ENSEMBL:
Gene Tree for RPL12P4 (if available)
TreeFam:
Gene Tree for RPL12P4 (if available)

No data available for Orthologs for RPL12P4 Gene

Paralogs for RPL12P4 Gene

No data available for Paralogs for RPL12P4 Gene

Variants for RPL12P4 Gene

Additional Variant Information for RPL12P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P4 Gene

Disorders for RPL12P4 Gene

Additional Disease Information for RPL12P4

Genetic Association Database
(GAD)

No disorders were found for RPL12P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL12P4 Gene

Publications for RPL12P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs. (PMID: 20195266) Adkins DE … van den Oord EJ (Molecular psychiatry 2011) 44 58
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 44 58
  4. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin EJ … Vasan RS (BMC medical genetics 2007) 44 58

Products for RPL12P4 Gene

Sources for RPL12P4 Gene

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