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Aliases for RPL12P39 Gene

Subcategory (RNA class) for RPL12P39 Gene


Aliases for RPL12P39 Gene

  • Ribosomal Protein L12 Pseudogene 39 2 3 5
  • RPL12_20_1611 3

External Ids for RPL12P39 Gene

ORGUL Members for RPL12P39 Gene

Previous GeneCards Identifiers for RPL12P39 Gene

  • GC18U900479
  • GC18P061740

Summaries for RPL12P39 Gene

GeneCards Summary for RPL12P39 Gene

RPL12P39 (Ribosomal Protein L12 Pseudogene 39) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL12P39 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P39 Gene

Genomics for RPL12P39 Gene

GeneHancer (GH) Regulatory Elements for RPL12P39 Gene

Promoters and enhancers for RPL12P39 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I063979 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.2 -92.4 -92443 0.6 ELF3 CTCF ZNF654 TEAD1 ZFP37 TRIM22 ELF1 RAD21 TEAD3 SMC3 SERPINB8 SERPINB10 HMSD LOC105372165 RPL12P39
GH18I063968 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.1 -101.5 -101483 3.4 HDGF PKNOX1 ATF1 SIN3A DMAP1 ZNF48 YY1 ETS1 GLIS2 ELK1 SERPINB8 LOC105372165 SERPINB10 HMSD RPL12P39
GH18I063974 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.2 -96.7 -96657 1.4 CTCF FOXA2 MAX RAD21 YY1 HNF4G ZNF143 SMC3 RXRA REST SERPINB10 SERPINB8 LOC105372165 HMSD RPL12P39
GH18I063990 Enhancer 0.6 dbSUPER 0.2 -78.9 -78874 5.3 CTCF STAT1 ZNF654 TRIM22 CEBPB RAD21 ATF3 SMC3 ZNF143 SERPINB8 SERPINB10 LOC105372165 RPL12P39
GH18I063980 Enhancer 0.4 ENCODE dbSUPER 0.2 -92.0 -91971 0.2 SERPINB10 SERPINB8 LOC105372165 HMSD RPL12P39
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL12P39 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL12P39 Gene

Genomic Locations for RPL12P39 Gene
496 bases
Plus strand

Genomic View for RPL12P39 Gene

Genes around RPL12P39 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P39 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P39 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P39 Gene

Proteins for RPL12P39 Gene

Post-translational modifications for RPL12P39 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P39 Gene

Domains & Families for RPL12P39 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P39 Gene

Function for RPL12P39 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P39 Gene

Localization for RPL12P39 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P39 Gene

Pathways & Interactions for RPL12P39 Gene

SuperPathways for RPL12P39 Gene

No Data Available

Interacting Proteins for RPL12P39 Gene

Gene Ontology (GO) - Biological Process for RPL12P39 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL12P39 Gene

Drugs & Compounds for RPL12P39 Gene

No Compound Related Data Available

Transcripts for RPL12P39 Gene

mRNA/cDNA for RPL12P39 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P39 Gene

No ASD Table

Relevant External Links for RPL12P39 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL12P39 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL12P39 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL12P39 Gene:

genes like me logo Genes that share expression patterns with RPL12P39: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P39 Gene

Orthologs for RPL12P39 Gene

Evolution for RPL12P39 Gene

Gene Tree for RPL12P39 (if available)
Gene Tree for RPL12P39 (if available)

No data available for Orthologs for RPL12P39 Gene

Paralogs for RPL12P39 Gene

No data available for Paralogs for RPL12P39 Gene

Variants for RPL12P39 Gene

Additional Variant Information for RPL12P39 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P39 Gene

Disorders for RPL12P39 Gene

No disorders were found for RPL12P39 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL12P39 Gene

Publications for RPL12P39 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL12P39 Gene

Sources for RPL12P39 Gene

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