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Aliases for RPL12P38 Gene
External Ids for RPL12P38 Gene
- HGNC: 36838
- Entrez Gene: 645688
- Ensembl: ENSG00000213228
Previous GeneCards Identifiers for RPL12P38 Gene
- GC17M055867
- GC17M058513
Summaries for RPL12P38 Gene
GeneCards Summary for RPL12P38 Gene
RPL12P38 (Ribosomal Protein L12 Pseudogene 38) is a Pseudogene.
Additional gene information for RPL12P38 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL12P38 Gene
Genomics for RPL12P38 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPL12P38 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH17J060435 | Promoter/Enhancer | 1.4 | Ensembl ENCODE CraniofacialAtlas | 600.7 | -0.1 | -129 | 1 | CTCF REST ZNF629 IKZF1 FOXA1 LARP7 ZNF143 RXRB RAD21 IRF2 | HMGN2P42 RPL12P38 C17orf64 HEATR6 CA4 piR-48325-065 USP32 APPBP2 | |
| GH17J060437 | Promoter | 0.6 | Ensembl | 600.7 | -1.7 | -1705 | 1 | PRDM1 CEBPG EBF1 CEBPB | RPL12P38 piR-48325-065 USP32 APPBP2 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPL12P38 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPL12P38 Gene
Genomic Locations for RPL12P38 Gene
- chr17:60,433,678-60,435,996
- (GRCh38/hg38)
- Size:
- 2,319 bases
- Orientation:
- Minus strand
- chr17:58,511,039-58,513,357
- (GRCh37/hg19)
- Size:
- 2,319 bases
- Orientation:
- Minus strand
Genomic View for RPL12P38 Gene
Genes around RPL12P38 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q23.2 by HGNC
- 17q23.2 by Entrez Gene
- 17q23.2 by Ensembl
RPL12P38 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL12P38 Gene
Proteins for RPL12P38 Gene
Post-translational modifications for RPL12P38 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL12P38
- Origene Custom Protein Services for RPL12P38
No data available for DME Specific Peptides for RPL12P38 Gene
Domains & Families for RPL12P38 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL12P38 Gene
Function for RPL12P38 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL12P38 - Select products 50% OFF >
- * RPL12P38 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL12P38
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P38 Gene
Localization for RPL12P38 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P38 Gene
Transcripts for RPL12P38 Gene
mRNA/cDNA for RPL12P38 Gene
- 1 NCBI additional mRNA sequence :
- 2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000471280 490 nts (view in UCSC)
- ENST00000588627 2319 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL12P38 - Select products 50% OFF >
- * RPL12P38 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL12P38
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for RPL12P38 Gene
- GeneLoc Exon Structure for
- RPL12P38
Expression for RPL12P38 Gene
mRNA differential expression in normal tissues according to GTEx for RPL12P38 Gene
This gene is overexpressed in Testis (x10.6).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for RPL12P38
SOURCE GeneReport for Unigene cluster for RPL12P38 Gene:
Hs.631738
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P38 Gene
Orthologs for RPL12P38 Gene
No data available for Orthologs for RPL12P38 Gene
Paralogs for RPL12P38 Gene
No data available for Paralogs for RPL12P38 Gene
Variants for RPL12P38 Gene
Additional Variant Information for RPL12P38 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL12P38
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P38 Gene
Disorders for RPL12P38 Gene
Additional Disease Information for RPL12P38
No disorders were found for RPL12P38 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL12P38 Gene
Publications for RPL12P38 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
ExternalLinks
Products for RPL12P38 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL12P38
- Origene Custom Protein Services for RPL12P38
- Browse OriGene Inhibitory RNA Products For RPL12P38
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPL12P38
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL12P38
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPL12P38
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPL12P38
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPL12P38
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPL12P38
Sources for RPL12P38 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB