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Aliases for RPL12P38 Gene

Aliases for RPL12P38 Gene

  • Ribosomal Protein L12 Pseudogene 38 2 3 5
  • RPL12_14_1564 3

External Ids for RPL12P38 Gene

Previous GeneCards Identifiers for RPL12P38 Gene

  • GC17M055867
  • GC17M058513

Summaries for RPL12P38 Gene

GeneCards Summary for RPL12P38 Gene

RPL12P38 (Ribosomal Protein L12 Pseudogene 38) is a Pseudogene.

Additional gene information for RPL12P38 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P38 Gene

Genomics for RPL12P38 Gene

GeneHancer (GH) Regulatory Elements for RPL12P38 Gene

Promoters and enhancers for RPL12P38 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I060435 Enhancer 1.1 Ensembl ENCODE 550.8 -0.1 -107 1.1 ARID4B ZNF2 IRF4 SLC30A9 ARID2 ZNF143 DEK NCOA1 REST MIER2 HMGN2P42 RPL12P38 C17orf64 HEATR6 CA4 GC17M060489
GH17I060437 Enhancer 0.5 Ensembl 550.8 -1.5 -1505 0.6 MITF ZNF639 CEBPB CEBPG EBF1 PRDM1 HMGN2P42 RPL12P38 GC17M060489
GH17I060467 Enhancer 1.1 Ensembl ENCODE 0.3 -33.3 -33297 3 HDGF PKNOX1 ATF1 SMAD1 ARNT TCF12 ZNF121 ZNF766 E2F8 ARID2 RPL32P32 HEATR6 CLTC APPBP2 GC17M060489 RPL12P38
GH17I060442 Enhancer 0.7 ENCODE 0.4 -6.5 -6469 0.1 ELF3 SOX5 SAP130 TEAD1 ARID4B MXD4 CEBPG ELF1 ZSCAN9 ETS1 RPL12P38 GC17M060489
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL12P38 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL12P38 Gene

Genomic Locations for RPL12P38 Gene
chr17:60,433,678-60,435,996
(GRCh38/hg38)
Size:
2,319 bases
Orientation:
Minus strand
chr17:58,511,039-58,513,357
(GRCh37/hg19)

Genomic View for RPL12P38 Gene

Genes around RPL12P38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P38 Gene

Proteins for RPL12P38 Gene

Post-translational modifications for RPL12P38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P38 Gene

Domains & Families for RPL12P38 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P38 Gene

Function for RPL12P38 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P38 Gene

Localization for RPL12P38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P38 Gene

Pathways & Interactions for RPL12P38 Gene

SuperPathways for RPL12P38 Gene

No Data Available

Interacting Proteins for RPL12P38 Gene

Gene Ontology (GO) - Biological Process for RPL12P38 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P38 Gene

Drugs & Compounds for RPL12P38 Gene

No Compound Related Data Available

Transcripts for RPL12P38 Gene

mRNA/cDNA for RPL12P38 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPL12P38 Gene

Ribosomal protein L12 pseudogene 38:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P38 Gene

No ASD Table

Relevant External Links for RPL12P38 Gene

GeneLoc Exon Structure for
RPL12P38
ECgene alternative splicing isoforms for
RPL12P38

Expression for RPL12P38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL12P38 Gene

mRNA differential expression in normal tissues according to GTEx for RPL12P38 Gene

This gene is overexpressed in Testis (x10.6).

NURSA nuclear receptor signaling pathways regulating expression of RPL12P38 Gene:

RPL12P38

SOURCE GeneReport for Unigene cluster for RPL12P38 Gene:

Hs.631738
genes like me logo Genes that share expression patterns with RPL12P38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P38 Gene

Orthologs for RPL12P38 Gene

Evolution for RPL12P38 Gene

ENSEMBL:
Gene Tree for RPL12P38 (if available)
TreeFam:
Gene Tree for RPL12P38 (if available)

No data available for Orthologs for RPL12P38 Gene

Paralogs for RPL12P38 Gene

No data available for Paralogs for RPL12P38 Gene

Variants for RPL12P38 Gene

Additional Variant Information for RPL12P38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P38 Gene

Disorders for RPL12P38 Gene

Additional Disease Information for RPL12P38

No disorders were found for RPL12P38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL12P38 Gene

Publications for RPL12P38 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL12P38 Gene

Sources for RPL12P38 Gene

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