Aliases for RPL12P30 Gene

Aliases for RPL12P30 Gene

  • Ribosomal Protein L12 Pseudogene 30 2 3 5
  • RPL12_11_1132 3

External Ids for RPL12P30 Gene

Previous GeneCards Identifiers for RPL12P30 Gene

  • GC11U901257

Summaries for RPL12P30 Gene

GeneCards Summary for RPL12P30 Gene

RPL12P30 (Ribosomal Protein L12 Pseudogene 30) is a Pseudogene.

Additional gene information for RPL12P30 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL12P30 Gene

Genomics for RPL12P30 Gene

GeneHancer (GH) Regulatory Elements for RPL12P30 Gene

Promoters and enhancers for RPL12P30 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J030367 Enhancer 0.3 Ensembl 500.7 -1.4 -1360 0.2 NR2F1 RPL12P30 lnc-ARL14EP-5 LOC102723403
GH11J030322 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 12 -43.4 -43362 5.4 ZBTB40 ZNF217 EP300 ZSCAN5C NRF1 TCF12 MYC USF1 POLR2G SP1 ARL14EP ENSG00000254532 LOC105376607 RPL12P30 lnc-ARL14EP-4
GH11J030328 Enhancer 0.6 dbSUPER 11.9 -36.8 -36759 6.2 CTCF RAD21 TRIM22 FOXA2 ZNF316 SMC3 JUND MAFK ZNF654 HNF4A ARL14EP RPL12P30 lnc-ARL14EP-4
GH11J030407 Enhancer 0.7 Ensembl ENCODE 8.2 +39.4 39441 1 RFX1 FOXA2 SMAD4 FOXA1 BCL6 RARA BCL6B FOXA3 SOX13 RPL12P30 ARL14EP HSALNG0083395 ENSG00000255480 MPPED2
GH11J030479 Enhancer 1 Ensembl ENCODE CraniofacialAtlas 4.4 +113.2 113241 6.2 TRIM28 ATF2 MYNN ZBTB17 TCF7L2 GATA3 IKZF3 ZNF189 RCOR1 PRDM6 ARL14EP MPPED2 RPL12P30 HSALNG0083397 MPPED2-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL12P30 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL12P30 Gene

Genomic Locations for RPL12P30 Gene
chr11:30,368,060-30,368,688
(GRCh38/hg38)
Size:
629 bases
Orientation:
Plus strand
chr11:30,389,607-30,390,235
(GRCh37/hg19)
Size:
629 bases
Orientation:
Plus strand

Genomic View for RPL12P30 Gene

Genes around RPL12P30 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P30 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P30 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P30 Gene

Proteins for RPL12P30 Gene

Post-translational modifications for RPL12P30 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P30 Gene

Domains & Families for RPL12P30 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL12P30 Gene

Function for RPL12P30 Gene

Phenotypes From GWAS Catalog for RPL12P30 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P30 Gene

Localization for RPL12P30 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P30 Gene

Pathways & Interactions for RPL12P30 Gene

PathCards logo

SuperPathways for RPL12P30 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL12P30 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL12P30 Gene

Drugs & Compounds for RPL12P30 Gene

No Compound Related Data Available

Transcripts for RPL12P30 Gene

mRNA/cDNA for RPL12P30 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P30 Gene

No ASD Table

Relevant External Links for RPL12P30 Gene

GeneLoc Exon Structure for
RPL12P30

Expression for RPL12P30 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL12P30 Gene

genes like me logo Genes that share expression patterns with RPL12P30: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P30 Gene

Orthologs for RPL12P30 Gene

Evolution for RPL12P30 Gene

ENSEMBL:
Gene Tree for RPL12P30 (if available)
TreeFam:
Gene Tree for RPL12P30 (if available)

No data available for Orthologs for RPL12P30 Gene

Paralogs for RPL12P30 Gene

No data available for Paralogs for RPL12P30 Gene

Variants for RPL12P30 Gene

Additional Variant Information for RPL12P30 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P30

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P30 Gene

Disorders for RPL12P30 Gene

No disorders were found for RPL12P30 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL12P30 Gene

Publications for RPL12P30 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

Products for RPL12P30 Gene

Sources for RPL12P30 Gene