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Aliases for RPL12P29 Gene

Aliases for RPL12P29 Gene

  • Ribosomal Protein L12 Pseudogene 29 2 3 5
  • RPL12_8_1073 3

External Ids for RPL12P29 Gene

Previous GeneCards Identifiers for RPL12P29 Gene

  • GC10U901097
  • GC10M086149

Summaries for RPL12P29 Gene

GeneCards Summary for RPL12P29 Gene

RPL12P29 (Ribosomal Protein L12 Pseudogene 29) is a Pseudogene.

Additional gene information for RPL12P29 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P29 Gene

Genomics for RPL12P29 Gene

GeneHancer (GH) Regulatory Elements for RPL12P29 Gene

Promoters and enhancers for RPL12P29 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I084327 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 +60.0 60049 5.1 HDGF PKNOX1 SMAD1 FOXA2 ARNT ARID4B SIN3A YY1 POLR2B ZNF766 CCSER2 RPL12P29
GH10I084375 Enhancer 0.6 ENCODE 0.4 +14.6 14599 0.2 MEIS2 CTCF PKNOX1 ZNF654 ZNF362 SOX6 REST ZEB2 RAD21 ZNF143 RPL12P29 CCSER2
GH10I084333 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.2 +54.2 54188 4.7 HDAC1 PKNOX1 SIN3A TCF12 EGR1 SCRT2 RCOR1 FOS IKZF2 RUNX3 CCSER2 RPL12P29
GH10I084348 Enhancer 0.7 Ensembl ENCODE 0.3 +40.6 40642 1.5 ZNF202 JUND ZNF362 JUN FOS ENSG00000271933 RPS3AP5 LRIT2 CCSER2 RPL12P29
GH10I084352 Enhancer 0.6 ENCODE 0.3 +37.3 37279 0.2 CTCF ZNF654 TRIM22 REST RAD21 ZFHX2 KLF16 EGR1 ARID2 ZNF143 LRIT2 CCSER2 RPL12P29
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL12P29 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL12P29 Gene

Genomic Locations for RPL12P29 Gene
chr10:84,389,120-84,389,719
(GRCh38/hg38)
Size:
600 bases
Orientation:
Minus strand
chr10:86,148,876-86,149,475
(GRCh37/hg19)

Genomic View for RPL12P29 Gene

Genes around RPL12P29 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P29 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P29 Gene

Proteins for RPL12P29 Gene

Post-translational modifications for RPL12P29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P29 Gene

Domains & Families for RPL12P29 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P29 Gene

Function for RPL12P29 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P29 Gene

Localization for RPL12P29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P29 Gene

Pathways & Interactions for RPL12P29 Gene

SuperPathways for RPL12P29 Gene

No Data Available

Interacting Proteins for RPL12P29 Gene

Gene Ontology (GO) - Biological Process for RPL12P29 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P29 Gene

Drugs & Compounds for RPL12P29 Gene

No Compound Related Data Available

Transcripts for RPL12P29 Gene

mRNA/cDNA for RPL12P29 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P29 Gene

No ASD Table

Relevant External Links for RPL12P29 Gene

GeneLoc Exon Structure for
RPL12P29
ECgene alternative splicing isoforms for
RPL12P29

Expression for RPL12P29 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL12P29 Gene

mRNA differential expression in normal tissues according to GTEx for RPL12P29 Gene

This gene is overexpressed in Testis (x18.8) and Brain - Cerebellum (x5.2).

NURSA nuclear receptor signaling pathways regulating expression of RPL12P29 Gene:

RPL12P29
genes like me logo Genes that share expression patterns with RPL12P29: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P29 Gene

Orthologs for RPL12P29 Gene

Evolution for RPL12P29 Gene

ENSEMBL:
Gene Tree for RPL12P29 (if available)
TreeFam:
Gene Tree for RPL12P29 (if available)

No data available for Orthologs for RPL12P29 Gene

Paralogs for RPL12P29 Gene

No data available for Paralogs for RPL12P29 Gene

Variants for RPL12P29 Gene

Additional Variant Information for RPL12P29 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P29

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P29 Gene

Disorders for RPL12P29 Gene

No disorders were found for RPL12P29 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL12P29 Gene

Publications for RPL12P29 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL12P29 Gene

Sources for RPL12P29 Gene

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