Aliases for RPL12P27 Gene

Aliases for RPL12P27 Gene

  • Ribosomal Protein L12 Pseudogene 27 2 3 5
  • RPL12_9_1087 3

External Ids for RPL12P27 Gene

Previous GeneCards Identifiers for RPL12P27 Gene

  • GC10M099052

Summaries for RPL12P27 Gene

GeneCards Summary for RPL12P27 Gene

RPL12P27 (Ribosomal Protein L12 Pseudogene 27) is a Pseudogene.

Additional gene information for RPL12P27 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL12P27 Gene

Genomics for RPL12P27 Gene

GeneHancer (GH) Regulatory Elements for RPL12P27 Gene

Promoters and enhancers for RPL12P27 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J097307 Enhancer 0.8 Ensembl dbSUPER 755.1 +1.7 1746 2.2 ZBTB40 FOXA1 HLF SP1 CREB1 CEBPA RXRA PRDM10 FOXA2 ZNF629 RPL12P27 ARHGAP19 ENSG00000277308
GH10J097311 Enhancer 0.3 Ensembl 755.5 -1.6 -1555 0.8 ZBTB17 RPL12P27 SLIT1 ARHGAP19 FRAT1
GH10J097291 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 4.9 +17.5 17535 3.4 ZNF785 SIN3A SP1 CTCF SIX5 MLX RBPJ POLR2A CTBP1 ATF1 ARHGAP19 ARHGAP19-SLIT1 R3HCC1L SLIT1 MMS19 EXOSC1 LOXL4 ENSG00000230928 LCOR RPL12P27
GH10J097217 Enhancer 0.7 Ensembl ENCODE 4.7 +91.5 91546 4.6 ETV6 CREM EED RUNX3 ZBTB17 JUNB JUN BATF ZNF513 CEBPG LOC105378447 piR-34946-002 SLIT1 ARHGAP19 SLIT1-AS1 EXOSC1 RPL12P27 piR-57670 ARHGAP19-SLIT1
GH10J097313 Enhancer 0.4 dbSUPER 5.5 -4.7 -4686 1.5 ZNF121 MAFK ZNF316 ARHGAP19 SLIT1 RRP12 RPL12P27 FRAT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL12P27 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL12P27 Gene

Genomic Locations for RPL12P27 Gene
chr10:97,309,138-97,310,046
(GRCh38/hg38)
Size:
909 bases
Orientation:
Minus strand
chr10:99,068,895-99,069,803
(GRCh37/hg19)
Size:
909 bases
Orientation:
Minus strand

Genomic View for RPL12P27 Gene

Genes around RPL12P27 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P27 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P27 Gene

Proteins for RPL12P27 Gene

Post-translational modifications for RPL12P27 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P27 Gene

Domains & Families for RPL12P27 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL12P27 Gene

Function for RPL12P27 Gene

Phenotypes From GWAS Catalog for RPL12P27 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P27 Gene

Localization for RPL12P27 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P27 Gene

Pathways & Interactions for RPL12P27 Gene

PathCards logo

SuperPathways for RPL12P27 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL12P27 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P27 Gene

Drugs & Compounds for RPL12P27 Gene

No Compound Related Data Available

Transcripts for RPL12P27 Gene

mRNA/cDNA for RPL12P27 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P27 Gene

No ASD Table

Relevant External Links for RPL12P27 Gene

GeneLoc Exon Structure for
RPL12P27
ECgene alternative splicing isoforms for
RPL12P27

Expression for RPL12P27 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL12P27 Gene

mRNA differential expression in normal tissues according to GTEx for RPL12P27 Gene

This gene is overexpressed in Whole Blood (x31.5).

NURSA nuclear receptor signaling pathways regulating expression of RPL12P27 Gene:

RPL12P27
genes like me logo Genes that share expression patterns with RPL12P27: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P27 Gene

Orthologs for RPL12P27 Gene

Evolution for RPL12P27 Gene

ENSEMBL:
Gene Tree for RPL12P27 (if available)
TreeFam:
Gene Tree for RPL12P27 (if available)

No data available for Orthologs for RPL12P27 Gene

Paralogs for RPL12P27 Gene

No data available for Paralogs for RPL12P27 Gene

Variants for RPL12P27 Gene

Additional Variant Information for RPL12P27 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P27

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P27 Gene

Disorders for RPL12P27 Gene

No disorders were found for RPL12P27 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL12P27 Gene

Publications for RPL12P27 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 56

No data available for External Links for RPL12P27 Gene

Products for RPL12P27 Gene

Sources for RPL12P27 Gene