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Aliases for RPL12P25 Gene

Aliases for RPL12P25 Gene

  • Ribosomal Protein L12 Pseudogene 25 2 3 5
  • RPL12_9_954 3

External Ids for RPL12P25 Gene

Previous GeneCards Identifiers for RPL12P25 Gene

  • GC09U901252

Summaries for RPL12P25 Gene

GeneCards Summary for RPL12P25 Gene

RPL12P25 (Ribosomal Protein L12 Pseudogene 25) is a Pseudogene.

Additional gene information for RPL12P25 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P25 Gene

Genomics for RPL12P25 Gene

GeneHancer (GH) Regulatory Elements for RPL12P25 Gene

Promoters and enhancers for RPL12P25 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I000476 Enhancer 0.4 ENCODE 550.8 -0.2 -223 1.3 GATA3 FOS RPL12P25 KANK1 ENSG00000227155
GH09I000468 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 21.9 -7.9 -7851 3.1 HDGF MLX ARID4B SIN3A DMAP1 ZNF48 POLR2B GLIS2 KLF7 SP3 KANK1 RPL12P25 WASHC1 CBWD1 FOXD4 ENSG00000227155 LOC105375945
GH09I000276 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 13.8 -198.2 -198214 6.6 PKNOX1 NFIB MZF1 FEZF1 BATF ZNF213 ZNF366 ZNF350 OVOL3 ZNF398 WASHC1 DOCK8 CBWD1 RPL12P25 C9orf66 ENSG00000235880 GC09M000242
GH09I000268 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -208.7 -208651 1.4 ZNF316 ZNF740 ZNF140 MAFG ID3 NFE2 EMSY CBWD1 DOCK8 WASHC1 RPL12P25 C9orf66 KANK1 ENSG00000235880 GC09P000245 GC09M000242
GH09I000489 Enhancer 0.8 ENCODE 6.1 +11.6 11616 0.1 FOXA2 SIN3A RAD21 RARA YY1 MIXL1 HMG20B RXRA REST SP1 ENSG00000228115 DOCK8 C9orf66 RPL12P25 ENSG00000227155 KANK1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL12P25 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL12P25 Gene

Genomic Locations for RPL12P25 Gene
chr9:477,750-478,423
(GRCh38/hg38)
Size:
674 bases
Orientation:
Plus strand
chr9:477,750-478,423
(GRCh37/hg19)

Genomic View for RPL12P25 Gene

Genes around RPL12P25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P25 Gene

Proteins for RPL12P25 Gene

Post-translational modifications for RPL12P25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P25 Gene

Domains & Families for RPL12P25 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P25 Gene

Function for RPL12P25 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P25 Gene

Localization for RPL12P25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P25 Gene

Pathways & Interactions for RPL12P25 Gene

SuperPathways for RPL12P25 Gene

No Data Available

Interacting Proteins for RPL12P25 Gene

Gene Ontology (GO) - Biological Process for RPL12P25 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P25 Gene

Drugs & Compounds for RPL12P25 Gene

No Compound Related Data Available

Transcripts for RPL12P25 Gene

mRNA/cDNA for RPL12P25 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P25 Gene

No ASD Table

Relevant External Links for RPL12P25 Gene

GeneLoc Exon Structure for
RPL12P25
ECgene alternative splicing isoforms for
RPL12P25

Expression for RPL12P25 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL12P25 Gene

mRNA differential expression in normal tissues according to GTEx for RPL12P25 Gene

This gene is overexpressed in Pituitary (x7.2) and Testis (x5.8).

NURSA nuclear receptor signaling pathways regulating expression of RPL12P25 Gene:

RPL12P25
genes like me logo Genes that share expression patterns with RPL12P25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P25 Gene

Orthologs for RPL12P25 Gene

Evolution for RPL12P25 Gene

ENSEMBL:
Gene Tree for RPL12P25 (if available)
TreeFam:
Gene Tree for RPL12P25 (if available)

No data available for Orthologs for RPL12P25 Gene

Paralogs for RPL12P25 Gene

No data available for Paralogs for RPL12P25 Gene

Variants for RPL12P25 Gene

Additional Variant Information for RPL12P25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P25

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P25 Gene

Disorders for RPL12P25 Gene

No disorders were found for RPL12P25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL12P25 Gene

Publications for RPL12P25 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL12P25 Gene

Sources for RPL12P25 Gene

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