Aliases for RPL12P16 Gene

Aliases for RPL12P16 Gene

  • Ribosomal Protein L12 Pseudogene 16 2 3 5
  • RPL12_4_315 3

External Ids for RPL12P16 Gene

Previous GeneCards Identifiers for RPL12P16 Gene

  • GC02P203765
  • GC02P204056

Summaries for RPL12P16 Gene

GeneCards Summary for RPL12P16 Gene

RPL12P16 (Ribosomal Protein L12 Pseudogene 16) is a Pseudogene.

Additional gene information for RPL12P16 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL12P16 Gene

Genomics for RPL12P16 Gene

GeneHancer (GH) Regulatory Elements for RPL12P16 Gene

Promoters and enhancers for RPL12P16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J202264 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.2 -923.9 -923891 5.2 EP300 FOXK2 ZBTB40 ZNF217 SIN3A TCF12 MYC USF1 POLR2G SP1 NOP58 NBEAL1 CYP20A1 ENSG00000228513 RPL12P16 ENSG00000213090 CDK15 ENSG00000273456 FAM117B ALS2
GH02J202236 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 11.1 -952.7 -952677 3.2 ZBTB40 ZNF217 EP300 POLR2G PHF8 ZFX POLR2A KDM6A ZBTB10 GABPA HSALNG0021598 LOC100287425 SUMO1 NOP58 NBEAL1 ENSG00000228513 RPL12P16 ENSG00000213090 CDK15 ENSG00000273456
GH02J203819 Enhancer 1.1 Ensembl ENCODE 11.2 +629.3 629297 1.1 POLR2G NCOR1 KDM6A TCF7 ZBTB25 TGIF2 ZBTB7A SKI TEAD1 ZBTB26 CYP20A1 NBEAL1 ENSG00000228513 RPL12P16 RAPH1 RF00017-3410 CTLA4
GH02J203185 Enhancer 0.5 Ensembl 0.7 -4.8 -4791 0.6 PBX2 GATA2 MITF MEIS2 GATA1 SOX6 CBFA2T3 NBEAL1 RPL12P16 RPL23AP36 lnc-WDR12-3 RF00017-3406
GH02J203175 Enhancer 0.4 Ensembl 0.4 -15.2 -15191 0.6 FOXA2 JUND FOXA1 FOXA3 NBEAL1 ICA1L RPL12P16 lnc-WDR12-3 RPL23AP36 RF00017-3406
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL12P16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL12P16 Gene

Genomic Locations for RPL12P16 Gene
chr2:203,190,692-203,191,319
(GRCh38/hg38)
Size:
628 bases
Orientation:
Plus strand
chr2:204,055,415-204,056,042
(GRCh37/hg19)
Size:
628 bases
Orientation:
Plus strand

Genomic View for RPL12P16 Gene

Genes around RPL12P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P16 Gene

Proteins for RPL12P16 Gene

Post-translational modifications for RPL12P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P16 Gene

Domains & Families for RPL12P16 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL12P16 Gene

Function for RPL12P16 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P16 Gene

Localization for RPL12P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P16 Gene

Pathways & Interactions for RPL12P16 Gene

PathCards logo

SuperPathways for RPL12P16 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL12P16 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL12P16 Gene

Drugs & Compounds for RPL12P16 Gene

No Compound Related Data Available

Transcripts for RPL12P16 Gene

mRNA/cDNA for RPL12P16 Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P16 Gene

No ASD Table

Relevant External Links for RPL12P16 Gene

GeneLoc Exon Structure for
RPL12P16

Expression for RPL12P16 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P16 Gene

Orthologs for RPL12P16 Gene

Evolution for RPL12P16 Gene

ENSEMBL:
Gene Tree for RPL12P16 (if available)
TreeFam:
Gene Tree for RPL12P16 (if available)

No data available for Orthologs for RPL12P16 Gene

Paralogs for RPL12P16 Gene

No data available for Paralogs for RPL12P16 Gene

Variants for RPL12P16 Gene

Additional Variant Information for RPL12P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P16 Gene

Disorders for RPL12P16 Gene

Additional Disease Information for RPL12P16

No disorders were found for RPL12P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL12P16 Gene

Publications for RPL12P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

Products for RPL12P16 Gene

Sources for RPL12P16 Gene