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Aliases for RPL12P16 Gene

Aliases for RPL12P16 Gene

  • Ribosomal Protein L12 Pseudogene 16 2 3 5
  • RPL12_4_315 3

External Ids for RPL12P16 Gene

Previous GeneCards Identifiers for RPL12P16 Gene

  • GC02P203765
  • GC02P204056

Summaries for RPL12P16 Gene

GeneCards Summary for RPL12P16 Gene

RPL12P16 (Ribosomal Protein L12 Pseudogene 16) is a Pseudogene.

Additional gene information for RPL12P16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P16 Gene

Genomics for RPL12P16 Gene

GeneHancer (GH) Regulatory Elements for RPL12P16 Gene

Promoters and enhancers for RPL12P16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I202264 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.7 -924.4 -924386 3.9 HDGF HNRNPUL1 PKNOX1 SMAD1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 NOP58 LOC100420110 RPL12P16 CYP20A1 NBEAL1 ENSG00000273456 FAM117B PIR47513 GC02P202236
GH02I202910 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.9 -278.7 -278691 3.2 FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 POLR2B ZNF207 GC02M202910 CARF WDR12 NBEAL1 NOP58 RPL12P16 CYP20A1 GC02M202888
GH02I203164 Enhancer 0.3 ENCODE 0.3 -25.9 -25939 0.2 FOS RPL12P16 RPL23AP36 NBEAL1
GH02I203105 Enhancer 0.4 ENCODE 0.2 -84.2 -84238 1.3 ATF1 JUN ATF2 CYP20A1 RPL23AP36 RPL12P16 NBEAL1
GH02I203109 Enhancer 0.3 ENCODE 0.2 -81.6 -81579 0.2 KLF1 RPL23AP36 RPL12P16 NBEAL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL12P16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL12P16 Gene

Genomic Locations for RPL12P16 Gene
chr2:203,190,692-203,191,319
(GRCh38/hg38)
Size:
628 bases
Orientation:
Plus strand
chr2:204,055,415-204,056,042
(GRCh37/hg19)

Genomic View for RPL12P16 Gene

Genes around RPL12P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P16 Gene

Proteins for RPL12P16 Gene

Post-translational modifications for RPL12P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P16 Gene

Domains & Families for RPL12P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P16 Gene

Function for RPL12P16 Gene

Phenotypes From GWAS Catalog for RPL12P16 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P16 Gene

Localization for RPL12P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P16 Gene

Pathways & Interactions for RPL12P16 Gene

SuperPathways for RPL12P16 Gene

No Data Available

Interacting Proteins for RPL12P16 Gene

Gene Ontology (GO) - Biological Process for RPL12P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P16 Gene

Drugs & Compounds for RPL12P16 Gene

No Compound Related Data Available

Transcripts for RPL12P16 Gene

mRNA/cDNA for RPL12P16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P16 Gene

No ASD Table

Relevant External Links for RPL12P16 Gene

GeneLoc Exon Structure for
RPL12P16
ECgene alternative splicing isoforms for
RPL12P16

Expression for RPL12P16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL12P16 Gene:

RPL12P16
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P16 Gene

Orthologs for RPL12P16 Gene

Evolution for RPL12P16 Gene

ENSEMBL:
Gene Tree for RPL12P16 (if available)
TreeFam:
Gene Tree for RPL12P16 (if available)

No data available for Orthologs for RPL12P16 Gene

Paralogs for RPL12P16 Gene

No data available for Paralogs for RPL12P16 Gene

Variants for RPL12P16 Gene

Additional Variant Information for RPL12P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P16 Gene

Disorders for RPL12P16 Gene

Additional Disease Information for RPL12P16

No disorders were found for RPL12P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL12P16 Gene

Publications for RPL12P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL12P16 Gene

Sources for RPL12P16 Gene

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