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Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L11P family of ribosomal proteins. It is located in the cytoplasm. The protein binds directly to the 26S rRNA. This gene is co-transcribed with the U65 snoRNA, which is located in its fourth intron. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]
RPL12 (Ribosomal Protein L12) is a Protein Coding gene. Diseases associated with RPL12 include Neuronopathy, Distal Hereditary Motor, Type Viii and Diamond-Blackfan Anemia. Among its related pathways are Viral mRNA Translation and HIV Life Cycle. Gene Ontology (GO) annotations related to this gene include structural constituent of ribosome. An important paralog of this gene is MRPL11.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0003723 | RNA binding | IEA,HDA | 22681889 |
GO:0003735 | structural constituent of ribosome | IBA,NAS | 12962325 |
GO:0005515 | protein binding | IPI | 22314232 |
GO:0070180 | large ribosomal subunit rRNA binding | IBA | 21873635 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005829 | cytosol | TAS | -- |
GO:0005840 | ribosome | IEA | -- |
GO:0005925 | focal adhesion | HDA | 21423176 |
GO:0014069 | postsynaptic density | IDA | 21170055 |
GO:0015934 | large ribosomal subunit | IBA | 21873635 |
SuperPathway | Contained pathways | ||
---|---|---|---|
1 | Viral mRNA Translation |
CFTR translational fidelity (class I mutations)
.79
.77
.53
|
|
2 | Influenza Viral RNA Transcription and Replication | ||
3 | rRNA processing in the nucleus and cytosol |
.89
|
|
4 | HIV Life Cycle |
.45
|
|
5 | Gene Expression |
.48
|
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000027 | ribosomal large subunit assembly | IBA | -- |
GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | TAS | -- |
GO:0006412 | translation | IBA,NAS | 12962325 |
GO:0006413 | translational initiation | TAS | -- |
GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | TAS | -- |
This gene was present in the common ancestor of eukaryotes.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | RPL12 31 31 |
|
OneToMany | |
Platypus (Ornithorhynchus anatinus) |
Mammalia | RPL12 31 |
|
OneToOne | |
Oppossum (Monodelphis domestica) |
Mammalia | -- 31 |
|
OneToMany | |
-- 31 |
|
OneToMany | |||
Dog (Canis familiaris) |
Mammalia | RPL12 30 31 |
|
OneToMany | |
-- 31 |
|
OneToMany | |||
-- 31 |
|
OneToMany | |||
-- 31 |
|
OneToMany | |||
Cow (Bos Taurus) |
Mammalia | RPL12 30 31 31 |
|
OneToMany | |
Rat (Rattus norvegicus) |
Mammalia | LOC102555453 30 |
|
||
Mouse (Mus musculus) |
Mammalia | Rpl12 30 17 31 |
|
OneToMany | |
Chicken (Gallus gallus) |
Aves | RPL12 30 31 |
|
OneToOne | |
Lizard (Anolis carolinensis) |
Reptilia | RPL12 31 |
|
OneToOne | |
Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | rpl12 30 |
|
||
Str.17078 30 |
|
||||
African clawed frog (Xenopus laevis) |
Amphibia | rpl12-prov 30 |
|
||
Zebrafish (Danio rerio) |
Actinopterygii | rpl12 30 31 |
|
OneToOne | |
Dr.24686 30 |
|
||||
Rainbow Trout (Oncorhynchus mykiss) |
Actinopterygii | Omy.8947 30 |
|
||
African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP010065 30 |
|
||
Fruit Fly (Drosophila melanogaster) |
Insecta | RpL12 30 31 32 |
|
OneToOne | |
Worm (Caenorhabditis elegans) |
Secernentea | rpl-12 30 31 32 |
|
OneToOne | |
Baker's yeast (Saccharomyces cerevisiae) |
Saccharomycetes | RPL12B 31 |
|
OneToMany | |
RPL12A 30 31 |
|
OneToMany | |||
A. gosspyii yeast (Eremothecium gossypii) |
Saccharomycetes | AGOS_AAR134W 30 |
|
||
K. Lactis Yeast (Kluyveromyces lactis) |
Saccharomycetes | KLLA0A01903g 30 |
|
||
Thale Cress (Arabidopsis thaliana) |
eudicotyledons | AT2G37190 30 |
|
||
Alicante grape (Vitis vinifera) |
eudicotyledons | Vvi.1323 30 |
|
||
Soybean (Glycine max) |
eudicotyledons | Gma.11290 30 |
|
||
Rice (Oryza sativa) |
Liliopsida | Os04g0598200 30 |
|
||
Barley (Hordeum vulgare) |
Liliopsida | Hv.656 30 |
|
||
Sea Squirt (Ciona savignyi) |
Ascidiacea | CSA.8009 31 |
|
OneToOne | |
Bread mold (Neurospora crassa) |
Ascomycetes | NCU01317 30 |
|
||
Fission Yeast (Schizosaccharomyces pombe) |
Schizosaccharomycetes | rpl1202 30 |
|
||
Sea Vase (Ciona intestinalis) |
Ascidiacea | Cin.3108 30 |
|
Disorder | Aliases | PubMed IDs |
---|---|---|
neuronopathy, distal hereditary motor, type viii |
|
|
diamond-blackfan anemia |
|
|