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Aliases for RPL11P3 Gene

Aliases for RPL11P3 Gene

  • Ribosomal Protein L11 Pseudogene 3 2 3 5
  • RPL11_2_1077 3

External Ids for RPL11P3 Gene

Previous GeneCards Identifiers for RPL11P3 Gene

  • GC10U901120
  • GC10P089710

Summaries for RPL11P3 Gene

GeneCards Summary for RPL11P3 Gene

RPL11P3 (Ribosomal Protein L11 Pseudogene 3) is a Pseudogene.

Additional gene information for RPL11P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL11P3 Gene

Genomics for RPL11P3 Gene

GeneHancer (GH) Regulatory Elements for RPL11P3 Gene

Promoters and enhancers for RPL11P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I087943 Enhancer 0.2 dbSUPER 550.8 +0.1 95 4.2 GC10P087947 RPL11P3 LIPJ PTEN
GH10I088878 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 31.6 +938.7 938736 10.9 HDGF PKNOX1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF213 STAMBPL1 RPL11P3 KIF20B FAS ACTA2-AS1 ENSG00000201548 RNLS LIPJ LIPM LIPN
GH10I087860 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 20.1 -80.7 -80743 9 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 PTEN KLLN NUTM2A-AS1 FAM35A RPL11P3 ADIRF-AS1 LIPJ ENSG00000224745
GH10I087840 Enhancer 1.5 FANTOM5 Ensembl ENCODE 21.3 -101.6 -101578 6.8 FOXA2 ARNT SIN3A FEZF1 ZNF2 ZNF213 FOS KLF13 SP3 JUNB GC10P087843 FAM35A NUTM2A-AS1 RPL11P3 NUTM2A ENSG00000261011 ENSG00000224745 LIPJ ATAD1 GC10P087845
GH10I087090 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11.2 -851.6 -851584 6.2 MLX ZFP64 DMAP1 YY1 ZNF213 ZNF143 SP3 NFYC SSRP1 ZNF610 FAM35A GLUD1 NUTM2A-AS1 ENSG00000272631 WAPL BMPR1A CFL1P1 RPL11P3 ENSG00000227896 BMS1P3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL11P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL11P3 Gene

Genomic Locations for RPL11P3 Gene
chr10:87,945,480-87,946,080
(GRCh38/hg38)
Size:
601 bases
Orientation:
Plus strand
chr10:89,705,237-89,705,837
(GRCh37/hg19)

Genomic View for RPL11P3 Gene

Genes around RPL11P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL11P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL11P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL11P3 Gene

Proteins for RPL11P3 Gene

Post-translational modifications for RPL11P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL11P3 Gene

Domains & Families for RPL11P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL11P3 Gene

Function for RPL11P3 Gene

Phenotypes From GWAS Catalog for RPL11P3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL11P3 Gene

Localization for RPL11P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL11P3 Gene

Pathways & Interactions for RPL11P3 Gene

SuperPathways for RPL11P3 Gene

No Data Available

Interacting Proteins for RPL11P3 Gene

Gene Ontology (GO) - Biological Process for RPL11P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL11P3 Gene

Drugs & Compounds for RPL11P3 Gene

No Compound Related Data Available

Transcripts for RPL11P3 Gene

mRNA/cDNA for RPL11P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL11P3 Gene

No ASD Table

Relevant External Links for RPL11P3 Gene

GeneLoc Exon Structure for
RPL11P3
ECgene alternative splicing isoforms for
RPL11P3

Expression for RPL11P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL11P3 Gene

mRNA differential expression in normal tissues according to GTEx for RPL11P3 Gene

This gene is overexpressed in Whole Blood (x5.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL11P3 Gene:

RPL11P3
genes like me logo Genes that share expression patterns with RPL11P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL11P3 Gene

Orthologs for RPL11P3 Gene

Evolution for RPL11P3 Gene

ENSEMBL:
Gene Tree for RPL11P3 (if available)
TreeFam:
Gene Tree for RPL11P3 (if available)

No data available for Orthologs for RPL11P3 Gene

Paralogs for RPL11P3 Gene

No data available for Paralogs for RPL11P3 Gene

Variants for RPL11P3 Gene

Additional Variant Information for RPL11P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL11P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL11P3 Gene

Disorders for RPL11P3 Gene

Additional Disease Information for RPL11P3

Genetic Association Database
(GAD)

No disorders were found for RPL11P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL11P3 Gene

Publications for RPL11P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes. (PMID: 19430480) Barrett JC … Type 1 Diabetes Genetics Consortium (Nature genetics 2009) 44 58
  3. Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study. (PMID: 17903297) Seshadri S … Wolf PA (BMC medical genetics 2007) 44 58
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 44 58

Products for RPL11P3 Gene

Sources for RPL11P3 Gene

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