Aliases for RPL11P1 Gene

Aliases for RPL11P1 Gene

  • Ribosomal Protein L11 Pseudogene 1 2 3
  • Ribosomal Protein L11 (RPL11) Pseudogene 5
  • RPL11_1_236 3
  • AC007386.1 5

External Ids for RPL11P1 Gene

Previous GeneCards Identifiers for RPL11P1 Gene

  • GC02M065042
  • GC02M065043
  • GC02M065188

Summaries for RPL11P1 Gene

GeneCards Summary for RPL11P1 Gene

RPL11P1 (Ribosomal Protein L11 Pseudogene 1) is a Pseudogene.

Additional gene information for RPL11P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL11P1 Gene

Genomics for RPL11P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL11P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J064944 Enhancer 1.4 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 +14.1 14113 3.2 SP1 POLR2A BACH1 LARP7 ZNF143 RELA SMAD5 TRIM22 IRF3 PKNOX1 SLC1A4 RN7SL211P RNU6-548P LINC02576 AFTPH SERTAD2 LOC107985888 RPL11P1 LINC02245
GH02J064950 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +9.1 9067 3.9 JUND IKZF2 CEBPA ATF7 RUNX3 NR3C1 FOS FOXA2 JUN ATF2 SLC1A4 RPL11P1 LOC107985888 LINC02245 LOC107984063 SERTAD2
GH02J064943 Enhancer 1 ENCODE dbSUPER 0.4 +16.6 16637 1 HNRNPL GATAD2A TFE3 RXRB IRF2 SP1 PBX2 CEBPA KMT2B SOX13 LOC107985888 SLC1A4 RN7SL211P RNU6-548P LINC02576 CEP68 RPL11P1 LINC02245 SERTAD2
GH02J064962 Enhancer 0.5 Ensembl 0.7 -2.8 -2766 1.2 RAD21 CTCF RAD51 USF2 SMC3 SLC1A4 RNU6-548P RN7SL211P LINC02576 RPL11P1 piR-30449-082 LINC02245 LOC107984063 SERTAD2
GH02J064957 Enhancer 0.2 Ensembl 0.7 +2.5 2533 0.2 SLC1A4 RPL11P1 LOC107985888 LINC02245 LOC107984063 SERTAD2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL11P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL11P1 Gene

Genomic Locations for RPL11P1 Gene
chr2:64,960,008-64,960,634
(GRCh38/hg38)
Size:
627 bases
Orientation:
Minus strand
chr2:65,187,142-65,187,768
(GRCh37/hg19)
Size:
627 bases
Orientation:
Minus strand

Genomic View for RPL11P1 Gene

Genes around RPL11P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL11P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL11P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL11P1 Gene

Proteins for RPL11P1 Gene

Post-translational modifications for RPL11P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL11P1 Gene

Domains & Families for RPL11P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL11P1 Gene

Function for RPL11P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL11P1 Gene

Localization for RPL11P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL11P1 Gene

Pathways & Interactions for RPL11P1 Gene

PathCards logo

SuperPathways for RPL11P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL11P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL11P1 Gene

Drugs & Compounds for RPL11P1 Gene

No Compound Related Data Available

Transcripts for RPL11P1 Gene

mRNA/cDNA for RPL11P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL11P1 Gene

No ASD Table

Relevant External Links for RPL11P1 Gene

GeneLoc Exon Structure for
RPL11P1

Expression for RPL11P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL11P1 Gene

mRNA differential expression in normal tissues according to GTEx for RPL11P1 Gene

This gene is overexpressed in Brain - Cerebellum (x7.8) and Brain - Cerebellar Hemisphere (x6.9).
genes like me logo Genes that share expression patterns with RPL11P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL11P1 Gene

Orthologs for RPL11P1 Gene

Evolution for RPL11P1 Gene

ENSEMBL:
Gene Tree for RPL11P1 (if available)
TreeFam:
Gene Tree for RPL11P1 (if available)

No data available for Orthologs for RPL11P1 Gene

Paralogs for RPL11P1 Gene

No data available for Paralogs for RPL11P1 Gene

Variants for RPL11P1 Gene

Additional Variant Information for RPL11P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL11P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL11P1 Gene

Disorders for RPL11P1 Gene

Additional Disease Information for RPL11P1

Genetic Association Database
(GAD)

No disorders were found for RPL11P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL11P1 Gene

Publications for RPL11P1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL11P1 Gene

Products for RPL11P1 Gene

Sources for RPL11P1 Gene