Aliases for RPL10P9 Gene

Aliases for RPL10P9 Gene

  • Ribosomal Protein L10 Pseudogene 9 2 3 5
  • RPL10_1_637 3

External Ids for RPL10P9 Gene

Previous GeneCards Identifiers for RPL10P9 Gene

  • GC05P167976
  • GC05P167977
  • GC05P168044

Summaries for RPL10P9 Gene

GeneCards Summary for RPL10P9 Gene

RPL10P9 (Ribosomal Protein L10 Pseudogene 9) is a Pseudogene.

Additional gene information for RPL10P9 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL10P9 Gene

Genomics for RPL10P9 Gene

GeneHancer (GH) Regulatory Elements for RPL10P9 Gene

Promoters and enhancers for RPL10P9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J168617 Promoter 0.4 Ensembl 500.7 0.0 -28 0.2 ZSCAN29 RPL10P9 piR-30832-009 HSALNG0046447
GH05J168612 Enhancer 0.8 Ensembl ENCODE 0.7 -3.2 -3184 1.1 FOXA2 JUND ZNF189 RAD21 RXRA GLIS1 MAX HNF4A REST TEAD3 FBLL1 RPL10P9 HSALNG0046447
GH05J168600 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas 0.4 -16.0 -15960 2 EP300 ZNF217 ZIC2 KDM6A TRIM28 SKI TEAD1 ZBTB26 GATAD2B ZNF341 PANK3 FBLL1 ENSG00000254192 ENSG00000254042 SLIT3 RPL10P9 HSALNG0046447
GH05J168590 Enhancer 1.1 Ensembl ENCODE 0.4 -24.9 -24877 2.5 FOXK2 ZNF217 NCOR1 KDM6A TCF7 FOXA1 RFX1 CUX1 ZBTB25 SKI FBLL1 RARS1 PANK3 HSALNG0046447 RPL10P9
GH05J168583 Enhancer 0.8 Ensembl ENCODE 0.3 -31.9 -31949 2 MXI1 SPI1 NFE2 BATF EBF1 IKZF1 RCOR1 JUNB NFIC TBL1XR1 FBLL1 MIR103A1 RARS1 ENSG00000254192 PANK3 HSALNG0046447 RPL10P9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL10P9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL10P9 Gene

Genomic Locations for RPL10P9 Gene
chr5:168,616,329-168,617,055
(GRCh38/hg38)
Size:
727 bases
Orientation:
Plus strand
chr5:168,043,301-168,044,059
(GRCh37/hg19)
Size:
759 bases
Orientation:
Plus strand

Genomic View for RPL10P9 Gene

Genes around RPL10P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL10P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL10P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL10P9 Gene

Proteins for RPL10P9 Gene

Post-translational modifications for RPL10P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL10P9 Gene

Domains & Families for RPL10P9 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL10P9 Gene

Function for RPL10P9 Gene

Phenotypes for RPL10P9 Gene

genes like me logo Genes that share phenotypes with RPL10P9: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL10P9 Gene

Localization for RPL10P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL10P9 Gene

Pathways & Interactions for RPL10P9 Gene

PathCards logo

SuperPathways for RPL10P9 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL10P9 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL10P9 Gene

Drugs & Compounds for RPL10P9 Gene

No Compound Related Data Available

Transcripts for RPL10P9 Gene

mRNA/cDNA for RPL10P9 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL10P9 Gene

No ASD Table

Relevant External Links for RPL10P9 Gene

GeneLoc Exon Structure for
RPL10P9

Expression for RPL10P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL10P9 Gene

Protein differential expression in normal tissues from HIPED for RPL10P9 Gene

This gene is overexpressed in Heart (40.5) and Urine (28.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for RPL10P9 Gene



Protein tissue co-expression partners for RPL10P9 Gene

- Elite partner
genes like me logo Genes that share expression patterns with RPL10P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL10P9 Gene

Orthologs for RPL10P9 Gene

Evolution for RPL10P9 Gene

ENSEMBL:
Gene Tree for RPL10P9 (if available)
TreeFam:
Gene Tree for RPL10P9 (if available)

No data available for Orthologs for RPL10P9 Gene

Paralogs for RPL10P9 Gene

No data available for Paralogs for RPL10P9 Gene

Variants for RPL10P9 Gene

Additional Variant Information for RPL10P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL10P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL10P9 Gene

Disorders for RPL10P9 Gene

No disorders were found for RPL10P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL10P9 Gene

Publications for RPL10P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

Products for RPL10P9 Gene

Sources for RPL10P9 Gene