Aliases for RPL10P1 Gene

Aliases for RPL10P1 Gene

  • Ribosomal Protein L10 Pseudogene 1 2 3 5
  • 60S Ribosomal Protein L10 Pseudogene 3
  • Ribosomal Protein L10 Pseudogene 2
  • RPL10_7_1723 3
  • RPL10P 3

External Ids for RPL10P1 Gene

Previous HGNC Symbols for RPL10P1 Gene

  • RPL10P

Previous GeneCards Identifiers for RPL10P1 Gene

  • GC21P025371
  • GC21P027714
  • GC21P028792
  • GC21P014197
  • GC21M028793

Summaries for RPL10P1 Gene

GeneCards Summary for RPL10P1 Gene

RPL10P1 (Ribosomal Protein L10 Pseudogene 1) is a Pseudogene.

Additional gene information for RPL10P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL10P1 Gene

Genomics for RPL10P1 Gene

GeneHancer (GH) Regulatory Elements for RPL10P1 Gene

Promoters and enhancers for RPL10P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J027421 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.3 -3257 5.4 FOS TEAD4 NR2F2 CTCF NANOG TCF12 SPI1 EZH2 RXRA RAD21 RPL10P1 piR-31534-447 ENSG00000231236 LOC105372762 lnc-ADAMTS5-5
GH21J027429 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 -9.1 -9075 1.6 NR2F2 RXRA piR-31534-447 RPL10P1 LOC105372762 ENSG00000231236 lnc-ADAMTS5-5
GH21J027406 Enhancer 0.6 Ensembl ENCODE 0.4 +14.2 14242 1.6 ATF2 NR2F2 FOS GATA2 ATF7 RPL10P1 EIF4A1P1 ENSG00000231236 lnc-ADAMTS5-5
GH21J027370 Enhancer 0.7 Ensembl ENCODE 0.3 +49.7 49743 3.8 EP300 NR2F2 CEBPB MAFK FOS STAT3 GATA2 POU5F1 NANOG NFE2L2 ENSG00000236332 EIF4A1P1 RPL10P1 ENSG00000231236 lnc-ADAMTS5-5
GH21J027380 Enhancer 0.3 Ensembl ENCODE 0.3 +41.0 40999 1.3 EIF4A1P1 ENSG00000236332 RPL10P1 ENSG00000231236 lnc-ADAMTS5-5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL10P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL10P1 Gene

Genomic Locations for RPL10P1 Gene
chr21:27,420,318-27,421,044
(GRCh38/hg38)
Size:
727 bases
Orientation:
Minus strand
chr21:28,792,676-28,793,386
(GRCh37/hg19)
Size:
711 bases
Orientation:
Minus strand

Genomic View for RPL10P1 Gene

Genes around RPL10P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL10P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL10P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL10P1 Gene

Proteins for RPL10P1 Gene

Post-translational modifications for RPL10P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL10P1 Gene

Domains & Families for RPL10P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL10P1 Gene

Function for RPL10P1 Gene

Phenotypes From GWAS Catalog for RPL10P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL10P1 Gene

Localization for RPL10P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL10P1 Gene

Pathways & Interactions for RPL10P1 Gene

PathCards logo

SuperPathways for RPL10P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL10P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL10P1 Gene

Drugs & Compounds for RPL10P1 Gene

No Compound Related Data Available

Transcripts for RPL10P1 Gene

mRNA/cDNA for RPL10P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL10P1 Gene

No ASD Table

Relevant External Links for RPL10P1 Gene

GeneLoc Exon Structure for
RPL10P1

Expression for RPL10P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL10P1 Gene

mRNA differential expression in normal tissues according to GTEx for RPL10P1 Gene

This gene is overexpressed in Spleen (x37.4).
genes like me logo Genes that share expression patterns with RPL10P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL10P1 Gene

Orthologs for RPL10P1 Gene

Evolution for RPL10P1 Gene

ENSEMBL:
Gene Tree for RPL10P1 (if available)
TreeFam:
Gene Tree for RPL10P1 (if available)

No data available for Orthologs for RPL10P1 Gene

Paralogs for RPL10P1 Gene

No data available for Paralogs for RPL10P1 Gene

Variants for RPL10P1 Gene

Additional Variant Information for RPL10P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL10P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL10P1 Gene

Disorders for RPL10P1 Gene

Additional Disease Information for RPL10P1

Genetic Association Database
(GAD)

No disorders were found for RPL10P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL10P1 Gene

Publications for RPL10P1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 41 54

Products for RPL10P1 Gene

Sources for RPL10P1 Gene