Aliases for RPL10AP12 Gene

Aliases for RPL10AP12 Gene

  • Ribosomal Protein L10a Pseudogene 12 2 3
  • RPL10A_7_1502 3

External Ids for RPL10AP12 Gene

Previous GeneCards Identifiers for RPL10AP12 Gene

  • GC16M084407
  • GC16M085850

Summaries for RPL10AP12 Gene

GeneCards Summary for RPL10AP12 Gene

RPL10AP12 (Ribosomal Protein L10a Pseudogene 12) is a Pseudogene.

Additional gene information for RPL10AP12 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL10AP12 Gene

Genomics for RPL10AP12 Gene

GeneHancer (GH) Regulatory Elements for RPL10AP12 Gene

Promoters and enhancers for RPL10AP12 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J085821 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.4 -5.2 -5234 1.6 CTCF RBPJ MIXL1 CC2D1A RAD21 NFIB ZNF148 NKRF ELF3 MLLT1 ENSG00000270184 RNU1-103P MTHFSD ZDHHC7 RN7SL381P IRF8 COX4I1 RPL10AP12 ENSG00000286510
GH16J085819 Enhancer 0.8 Ensembl ENCODE 0.6 -2.9 -2893 0.7 CTCF RAD21 MLLT1 REST TRIM22 ZNF143 ZEB2 ZNF140 RUNX3 ESRRA MTHFSD RNU1-103P ENSG00000270184 RPL10AP12 ENSG00000286510
GH16J085844 Enhancer 0.9 FANTOM5 ENCODE 0.3 -28.4 -28352 0.3 MLX NR2F1 NR2F6 MIXL1 HLF MAX ZNF652 RERE ELF3 CEBPA ENSG00000286510 IRF8 COX4I1 EMC8 lnc-EMC8-5 RPL10AP12
GH16J085828 Enhancer 0.6 ENCODE 0.4 -12.8 -12804 1.4 LCORL MYC MAX MLLT1 ZEB2 NBN ZFHX2 EZH2 EBF1 POLR2A RPL10AP12 ENSG00000286510 lnc-EMC8-5
GH16J085831 Enhancer 0.6 Ensembl 0.4 -16.3 -16334 2.2 CREM IKZF1 ZBTB33 PKNOX1 MNT EED RUNX3 BATF EZH2 EBF1 ENSG00000286510 lnc-EMC8-5 RPL10AP12
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL10AP12 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL10AP12 Gene

Genomic Locations for RPL10AP12 Gene
chr16:85,815,846-85,816,567
(GRCh38/hg38)
Size:
722 bases
Orientation:
Minus strand
chr16:85,849,452-85,850,175
(GRCh37/hg19)
Size:
724 bases
Orientation:
Minus strand

Genomic View for RPL10AP12 Gene

Genes around RPL10AP12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL10AP12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL10AP12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL10AP12 Gene

Proteins for RPL10AP12 Gene

Post-translational modifications for RPL10AP12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL10AP12 Gene

Domains & Families for RPL10AP12 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL10AP12 Gene

Function for RPL10AP12 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL10AP12 Gene

Localization for RPL10AP12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL10AP12 Gene

Pathways & Interactions for RPL10AP12 Gene

PathCards logo

SuperPathways for RPL10AP12 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL10AP12 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL10AP12 Gene

Drugs & Compounds for RPL10AP12 Gene

No Compound Related Data Available

Transcripts for RPL10AP12 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL10AP12 Gene

No ASD Table

Relevant External Links for RPL10AP12 Gene

GeneLoc Exon Structure for
RPL10AP12
ECgene alternative splicing isoforms for
RPL10AP12

No data available for mRNA/cDNA for RPL10AP12 Gene

Expression for RPL10AP12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL10AP12 Gene

Protein differential expression in normal tissues from HIPED for RPL10AP12 Gene

This gene is overexpressed in Brain (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for RPL10AP12 Gene



Protein tissue co-expression partners for RPL10AP12 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL10AP12 Gene:

RPL10AP12
genes like me logo Genes that share expression patterns with RPL10AP12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL10AP12 Gene

Orthologs for RPL10AP12 Gene

No data available for Orthologs and Evolution for RPL10AP12 Gene

Paralogs for RPL10AP12 Gene

No data available for Paralogs for RPL10AP12 Gene

Variants for RPL10AP12 Gene

Additional Variant Information for RPL10AP12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL10AP12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL10AP12 Gene

Disorders for RPL10AP12 Gene

No disorders were found for RPL10AP12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL10AP12 Gene

Publications for RPL10AP12 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 56

No data available for External Links for RPL10AP12 Gene

Products for RPL10AP12 Gene

Sources for RPL10AP12 Gene