Aliases for RNY4P24 Gene

Aliases for RNY4P24 Gene

  • RNY4 Pseudogene 24 2 3 5
  • RNA, Ro-Associated Y4 Pseudogene 24 2 3

External Ids for RNY4P24 Gene

Previous GeneCards Identifiers for RNY4P24 Gene

  • GC00U933297
  • GC13P052975

Summaries for RNY4P24 Gene

GeneCards Summary for RNY4P24 Gene

RNY4P24 (RNY4 Pseudogene 24) is a Pseudogene.

Additional gene information for RNY4P24 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNY4P24 Gene

Genomics for RNY4P24 Gene

GeneHancer (GH) Regulatory Elements for RNY4P24 Gene

Promoters and enhancers for RNY4P24 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J052404 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 0.4 +5.4 5397 2.8 ZBTB26 FOXA2 KLF9 SP2 ZNF76 ZNF184 ZFHX2 SIN3A ZSCAN5A ZNF335 THSD1 TPTE2P2 HNRNPA1L2 piR-31470-139 RNY4P24 RF00019-033
GH13J052371 Enhancer 0.9 Ensembl ENCODE 0.3 -26.7 -26703 4.2 JUND HES1 ZNF341 FOXA2 KLF9 FOS POLR2A FOSL1 ZFHX2 NR2F1 CKAP2 TPTE2P2 ATP7B THSD1 TPTE2P3 HSALNG0097252 RF00019-033 RNY4P24
GH13J052394 Enhancer 0.4 Ensembl 0.7 -4.4 -4403 2.4 SPI1 ZFHX2 POLR2A EGR2 CKAP2 TPTE2P2 RNY4P24 RF00019-033 THSD1 HSALNG0097252
GH13J052347 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.2 -51.3 -51319 3 ZSCAN5C FOS ZNF639 REST MYC ZEB1 ZNF316 USF2 MAX CEBPB HSALNG0097252 LOC105370207 TPTE2P2 TPTE2P3 CKAP2 THSD1 RF00019-033 RNY4P24
GH13J052356 Enhancer 0.7 Ensembl 0.3 -43.6 -43603 1.6 ZNF639 ATF2 OSR2 WT1 ZNF184 FOS CEBPB ZNF610 ZNF335 ZBTB48 CKAP2 TPTE2P2 THSD1 HSALNG0097252 RF00019-033 RNY4P24
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNY4P24 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNY4P24 Gene

Genomic Locations for RNY4P24 Gene
chr13:52,400,004-52,400,099
(GRCh38/hg38)
Size:
96 bases
Orientation:
Plus strand
chr13:52,974,139-52,974,234
(GRCh37/hg19)
Size:
96 bases
Orientation:
Plus strand

Genomic View for RNY4P24 Gene

Genes around RNY4P24 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNY4P24 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNY4P24 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNY4P24 Gene

Proteins for RNY4P24 Gene

Post-translational modifications for RNY4P24 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNY4P24 Gene

Domains & Families for RNY4P24 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNY4P24 Gene

Function for RNY4P24 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNY4P24 Gene

Localization for RNY4P24 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNY4P24 Gene

Pathways & Interactions for RNY4P24 Gene

PathCards logo

SuperPathways for RNY4P24 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RNY4P24 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNY4P24 Gene

Drugs & Compounds for RNY4P24 Gene

No Compound Related Data Available

Transcripts for RNY4P24 Gene

mRNA/cDNA for RNY4P24 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNY4P24 Gene

No ASD Table

Relevant External Links for RNY4P24 Gene

GeneLoc Exon Structure for
RNY4P24

Expression for RNY4P24 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNY4P24 Gene

genes like me logo Genes that share expression patterns with RNY4P24: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNY4P24 Gene

Orthologs for RNY4P24 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RNY4P24 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 31
  • 100 (a)
OneToOne
Species where no ortholog for RNY4P24 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNY4P24 Gene

ENSEMBL:
Gene Tree for RNY4P24 (if available)
TreeFam:
Gene Tree for RNY4P24 (if available)

Paralogs for RNY4P24 Gene

No data available for Paralogs for RNY4P24 Gene

Variants for RNY4P24 Gene

Additional Variant Information for RNY4P24 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNY4P24

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNY4P24 Gene

Disorders for RNY4P24 Gene

No disorders were found for RNY4P24 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNY4P24 Gene

Publications for RNY4P24 Gene

No publications were found for RNY4P24 Gene.

Products for RNY4P24 Gene

Sources for RNY4P24 Gene