Aliases for RNY4P14 Gene

Aliases for RNY4P14 Gene

  • RNY4 Pseudogene 14 2 3 5
  • RNA, Ro-Associated Y4 Pseudogene 14 2 3
  • RNY4P14 5

External Ids for RNY4P14 Gene

Previous GeneCards Identifiers for RNY4P14 Gene

  • GC00U922774
  • GC13U900700
  • GC13M040360

Summaries for RNY4P14 Gene

GeneCards Summary for RNY4P14 Gene

RNY4P14 (RNY4 Pseudogene 14) is a Pseudogene.

Additional gene information for RNY4P14 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNY4P14 Gene

Genomics for RNY4P14 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RNY4P14 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J039786 Enhancer 0.7 Ensembl ENCODE 600.7 -0.6 -591 5.4 TEAD4 CTCF RAD21 MAFF MAFK NR2F2 ZFHX2 NR2F1 NANOG EGR2 RF00019-027 RNY4P14 COG6 lnc-LHFPL6-7 FOXO1
GH13J039775 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 +7.6 7612 5 CEBPG CREB1 CTCF RELA GTF2F1 CEBPB RAD21 RELB JUND RUNX3 COG6 ENSG00000212553 RNY4P14 RF00019-027 piR-61101-149 FOXO1
GH13J039765 Enhancer 0.9 Ensembl ENCODE 0.4 +18.3 18328 2.8 CTCF ZNF629 ZIC2 RAD21 ZNF501 ZNF600 ZNF561 SCRT2 ZSCAN5C OSR2 COG6 NHLRC3 ENSG00000212553 RNY4P14 RF00019-027 piR-61101-149 FOXO1
GH13J039801 Enhancer 0.8 Ensembl ENCODE 0.4 -18.3 -18254 3.7 CREB1 RFX1 ATF7 ESR1 CTBP1 ZNF592 PKNOX1 DPF2 NFIB FOXA1 ENSG00000212553 COG6 lnc-LHFPL6-7 RNY4P14 RF00019-027 FOXO1
GH13J039773 Enhancer 0.5 Ensembl ENCODE 0.4 +11.3 11310 0.8 JUND ZNF660 COG6 RF00019-027 RNY4P14 piR-61101-149 FOXO1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNY4P14 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RNY4P14 Gene

Genomic Locations for RNY4P14 Gene
chr13:39,785,415-39,785,510
(GRCh38/hg38)
Size:
96 bases
Orientation:
Minus strand
chr13:40,359,552-40,359,647
(GRCh37/hg19)
Size:
96 bases
Orientation:
Minus strand

Genomic View for RNY4P14 Gene

Genes around RNY4P14 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNY4P14 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNY4P14 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNY4P14 Gene

Proteins for RNY4P14 Gene

Post-translational modifications for RNY4P14 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNY4P14 Gene

Domains & Families for RNY4P14 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNY4P14 Gene

Function for RNY4P14 Gene

Phenotypes From GWAS Catalog for RNY4P14 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNY4P14 Gene

Localization for RNY4P14 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNY4P14 Gene

Pathways & Interactions for RNY4P14 Gene

PathCards logo

SuperPathways for RNY4P14 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNY4P14 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNY4P14 Gene

Drugs & Compounds for RNY4P14 Gene

No Compound Related Data Available

Transcripts for RNY4P14 Gene

mRNA/cDNA for RNY4P14 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNY4P14 Gene

No ASD Table

Relevant External Links for RNY4P14 Gene

GeneLoc Exon Structure for
RNY4P14

Expression for RNY4P14 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNY4P14 Gene

genes like me logo Genes that share expression patterns with RNY4P14: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNY4P14 Gene

Orthologs for RNY4P14 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNY4P14 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 31
  • 100 (a)
OneToOne
Cow
(Bos Taurus)
Mammalia Y_RNA 31
  • 92 (a)
OneToMany
Species where no ortholog for RNY4P14 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for RNY4P14 Gene

ENSEMBL:
Gene Tree for RNY4P14 (if available)
TreeFam:
Gene Tree for RNY4P14 (if available)

Paralogs for RNY4P14 Gene

No data available for Paralogs for RNY4P14 Gene

Variants for RNY4P14 Gene

Additional Variant Information for RNY4P14 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNY4P14

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNY4P14 Gene

Disorders for RNY4P14 Gene

Additional Disease Information for RNY4P14

No disorders were found for RNY4P14 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNY4P14 Gene

Publications for RNY4P14 Gene

No publications were found for RNY4P14 Gene.

No data available for Mastermind for RNY4P14 Gene

Products for RNY4P14 Gene

Sources for RNY4P14 Gene