Aliases for RNY4P10 Gene

Aliases for RNY4P10 Gene

  • RNY4 Pseudogene 10 2 3 5
  • RNA, Ro-Associated Y4 Pseudogene 10 2 3

External Ids for RNY4P10 Gene

Previous GeneCards Identifiers for RNY4P10 Gene

  • GC00U922736
  • GC06U901738
  • GC06P032909
  • GC06P033171

Summaries for RNY4P10 Gene

GeneCards Summary for RNY4P10 Gene

RNY4P10 (RNY4 Pseudogene 10) is a Pseudogene.

Additional gene information for RNY4P10 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNY4P10 Gene

Genomics for RNY4P10 Gene

GeneHancer (GH) Regulatory Elements for RNY4P10 Gene

Promoters and enhancers for RNY4P10 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J033198 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +1.3 1306 4.2 FOXK2 HNRNPK ZBTB40 ZNF217 CTCF SIN3A TCF12 NRF1 POLR2G SP1 RXRB NONHSAG045813.2 RNY4P10 SLC39A7 BRD2 LEMD2 RPS18 WDR46 DAXX RGL2
GH06J033197 Enhancer 1 ENCODE 500.7 -1.7 -1733 1.6 FOXK2 CTCF POLR2G USF1 NCOR1 KDM6A TCF7 FOXA1 REST RFX1 RNY4P10 HSD17B8 COL11A2 RXRB
GH06J032965 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 19.3 -228.9 -228932 10.4 RXRA EP300 FOXK2 HNRNPK ZNF217 CTCF ZSCAN5C SIN3A TCF12 NRF1 BRD2 HLA-DMA ENSG00000223837 NONHSAG045804.2 LEMD2 VPS52 RING1 RXRB HCG25 ATF6B
GH06J033203 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas 19.7 +6.9 6945 6.1 HNRNPK ZBTB40 ZNF217 EP300 CTCF SIN3A NRF1 POLR2G SP1 NCOR1 HSD17B8 RING1 MIR219A1 BRD2 LEMD2 WDR46 DAXX RGL2 ITPR3 RXRB
GH06J033270 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 10.6 +75.4 75357 8.7 FOXK2 HNRNPK ZBTB40 ZNF217 EP300 CTCF SIN3A NRF1 MYC POLR2G RPS18 VPS52 NONHSAG046700.2 piR-32331-006 BRD2 RING1 DAXX LEMD2 WDR46 RXRB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNY4P10 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNY4P10 Gene

Genomic Locations for RNY4P10 Gene
chr6:33,199,601-33,199,696
(GRCh38/hg38)
Size:
96 bases
Orientation:
Plus strand
chr6:33,167,378-33,167,472
(GRCh37/hg19)
Size:
95 bases
Orientation:
Plus strand

Genomic View for RNY4P10 Gene

Genes around RNY4P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNY4P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNY4P10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for RNY4P10 Gene

Post-translational modifications for RNY4P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNY4P10 Gene

Domains & Families for RNY4P10 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNY4P10 Gene

Function for RNY4P10 Gene

Phenotypes From GWAS Catalog for RNY4P10 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNY4P10 Gene

Localization for RNY4P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNY4P10 Gene

Pathways & Interactions for RNY4P10 Gene

PathCards logo

SuperPathways for RNY4P10 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RNY4P10 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNY4P10 Gene

Drugs & Compounds for RNY4P10 Gene

No Compound Related Data Available

Transcripts for RNY4P10 Gene

mRNA/cDNA for RNY4P10 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNY4P10 Gene

No ASD Table

Relevant External Links for RNY4P10 Gene

GeneLoc Exon Structure for
RNY4P10

Expression for RNY4P10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNY4P10 Gene

genes like me logo Genes that share expression patterns with RNY4P10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNY4P10 Gene

Orthologs for RNY4P10 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNY4P10 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 31
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia Y_RNA 31
  • 94 (a)
OneToMany
Species where no ortholog for RNY4P10 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNY4P10 Gene

ENSEMBL:
Gene Tree for RNY4P10 (if available)
TreeFam:
Gene Tree for RNY4P10 (if available)

Paralogs for RNY4P10 Gene

No data available for Paralogs for RNY4P10 Gene

Variants for RNY4P10 Gene

Additional Variant Information for RNY4P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNY4P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNY4P10 Gene

Disorders for RNY4P10 Gene

No disorders were found for RNY4P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNY4P10 Gene

Publications for RNY4P10 Gene

No publications were found for RNY4P10 Gene.

Products for RNY4P10 Gene

Sources for RNY4P10 Gene