Aliases for RNY3P15 Gene

Aliases for RNY3P15 Gene

  • RNY3 Pseudogene 15 2 3 5
  • RNA, Ro-Associated Y3 Pseudogene 15 2 3
  • RNY3P15 5

External Ids for RNY3P15 Gene

Previous GeneCards Identifiers for RNY3P15 Gene

  • GC06P034968
  • GC06P035517
  • GC06P042773
  • GC06P043107
  • GC06P043330
  • GC06P046027
  • GC06P037751
  • GC06P038375
  • GC06P038965
  • GC06P039553
  • GC06P040113
  • GC06P041178
  • GC06P041861
  • GC06P042508
  • GC06P047431
  • GC06P049487

Summaries for RNY3P15 Gene

GeneCards Summary for RNY3P15 Gene

RNY3P15 (RNY3 Pseudogene 15) is a Pseudogene.

Additional gene information for RNY3P15 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNY3P15 Gene

Genomics for RNY3P15 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RNY3P15 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J034875 Enhancer 0.8 ENCODE dbSUPER 0.7 +2.6 2551 2.1 POLR2A CEBPB MAFF ZNF316 RBM22 MAFK MAFG MEIS2 ATF3 ATF2 piR-37558 SCUBE3 UHRF1BP1 RNY3P15 HSALNG0049647 TAF11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNY3P15 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RNY3P15 Gene

Latest Assembly
chr6:34,873,831-34,873,927
(GRCh38/hg38)
Size:
97 bases
Orientation:
Plus strand

Previous Assembly
chr6:34,841,620-34,841,703
(GRCh37/hg19 by Entrez Gene)
Size:
84 bases
Orientation:
Plus strand

chr6:52,843,956-52,844,053
(GRCh37/hg19 by Ensembl)
Size:
98 bases
Orientation:
Minus strand

Genomic View for RNY3P15 Gene

Genes around RNY3P15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNY3P15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNY3P15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNY3P15 Gene

Proteins for RNY3P15 Gene

Post-translational modifications for RNY3P15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNY3P15 Gene

Domains & Families for RNY3P15 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNY3P15 Gene

Function for RNY3P15 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNY3P15 Gene

Localization for RNY3P15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNY3P15 Gene

Pathways & Interactions for RNY3P15 Gene

PathCards logo

SuperPathways for RNY3P15 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNY3P15 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNY3P15 Gene

Drugs & Compounds for RNY3P15 Gene

No Compound Related Data Available

Transcripts for RNY3P15 Gene

mRNA/cDNA for RNY3P15 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNY3P15 Gene

No ASD Table

Relevant External Links for RNY3P15 Gene

GeneLoc Exon Structure for
RNY3P15

Expression for RNY3P15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNY3P15 Gene

genes like me logo Genes that share expression patterns with RNY3P15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNY3P15 Gene

Orthologs for RNY3P15 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RNY3P15 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 30
  • 100 (a)
OneToOne
Species where no ortholog for RNY3P15 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for RNY3P15 Gene

ENSEMBL:
Gene Tree for RNY3P15 (if available)
TreeFam:
Gene Tree for RNY3P15 (if available)
Alliance of Genome Resources:
Additional Orthologs for RNY3P15

Paralogs for RNY3P15 Gene

No data available for Paralogs for RNY3P15 Gene

Variants for RNY3P15 Gene

Additional Variant Information for RNY3P15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNY3P15
Leiden Open Variation Database (LOVD)
RNY3P15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNY3P15 Gene

Disorders for RNY3P15 Gene

No disorders were found for RNY3P15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNY3P15 Gene

Publications for RNY3P15 Gene

No publications were found for RNY3P15 Gene.

No data available for Mastermind for RNY3P15 Gene

Products for RNY3P15 Gene

Sources for RNY3P15 Gene