Aliases for RNVU1-32 Gene

Aliases for RNVU1-32 Gene

  • RNA, Variant U1 Small Nuclear 32 2 3 5
  • RNA, U1 Small Nuclear 106, Pseudogene 2 3
  • RNVU1-32 2 5
  • U1A4 2 3
  • RNU1-106P 3
  • RF00003 168

External Ids for RNVU1-32 Gene

Previous HGNC Symbols for RNVU1-32 Gene

  • RNU1-106P

Previous GeneCards Identifiers for RNVU1-32 Gene

  • GC08U902903

Summaries for RNVU1-32 Gene

GeneCards Summary for RNVU1-32 Gene

RNVU1-32 (RNA, Variant U1 Small Nuclear 32) is a Pseudogene.

Rfam classification for RNVU1-32 Gene

Additional gene information for RNVU1-32 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RNVU1-32 Gene

Genomics for RNVU1-32 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RNVU1-32 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNVU1-32 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RNVU1-32 Gene

Genomic Locations for RNVU1-32 Gene
chr8:127,999,131-127,999,294
(GRCh38/hg38)
Size:
164 bases
Orientation:
Plus strand
chr8:129,011,377-129,011,540
(GRCh37/hg19)
Size:
164 bases
Orientation:
Plus strand

Genomic View for RNVU1-32 Gene

Genes around RNVU1-32 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNVU1-32 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNVU1-32 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNVU1-32 Gene

Proteins for RNVU1-32 Gene

Post-translational modifications for RNVU1-32 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNVU1-32 Gene

Domains & Families for RNVU1-32 Gene

Gene Families for RNVU1-32 Gene

genes like me logo Genes that share domains with RNVU1-32: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNVU1-32 Gene

Function for RNVU1-32 Gene

Phenotypes From GWAS Catalog for RNVU1-32 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNVU1-32 Gene

Localization for RNVU1-32 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNVU1-32 Gene

Pathways & Interactions for RNVU1-32 Gene

PathCards logo

SuperPathways for RNVU1-32 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNVU1-32 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNVU1-32 Gene

Drugs & Compounds for RNVU1-32 Gene

No Compound Related Data Available

Transcripts for RNVU1-32 Gene

mRNA/cDNA for RNVU1-32 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 RNACentral transcripts :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for RNVU1-32 Gene

No ASD Table

Relevant External Links for RNVU1-32 Gene

GeneLoc Exon Structure for
RNVU1-32

Expression for RNVU1-32 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNVU1-32 Gene

Orthologs for RNVU1-32 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNVU1-32 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia U1 31
  • 98 (a)
OneToOne
Oppossum
(Monodelphis domestica)
Mammalia U1 31
  • 89 (a)
ManyToMany
Cow
(Bos Taurus)
Mammalia U1 31
  • 69 (a)
OneToOne
Species where no ortholog for RNVU1-32 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for RNVU1-32 Gene

ENSEMBL:
Gene Tree for RNVU1-32 (if available)
TreeFam:
Gene Tree for RNVU1-32 (if available)

Paralogs for RNVU1-32 Gene

No data available for Paralogs for RNVU1-32 Gene

Variants for RNVU1-32 Gene

Additional Variant Information for RNVU1-32 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNVU1-32

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNVU1-32 Gene

Disorders for RNVU1-32 Gene

No disorders were found for RNVU1-32 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNVU1-32 Gene

Publications for RNVU1-32 Gene

  1. U1-like snRNAs lacking complementarity to canonical 5' splice sites. (PMID: 16829670) Kyriakopoulou C … Virtanen A (RNA (New York, N.Y.) 2006) 2 3

Products for RNVU1-32 Gene

Sources for RNVU1-32 Gene