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Aliases for RNVU1-14 Gene

Subcategory (RNA class) for RNVU1-14 Gene

snRNA

Quality Score for this RNA gene is

3

Aliases for RNVU1-14 Gene

  • RNA, Variant U1 Small Nuclear 14 2 3 5
  • RNU1-37 3
  • VU1.14 3

External Ids for RNVU1-14 Gene

ORGUL Members for RNVU1-14 Gene

Previous GeneCards Identifiers for RNVU1-14 Gene

  • GC01P148244
  • GC01P145295
  • GC01P145301
  • GC01P145309
  • GC01P145314
  • GC01P145318
  • GC01P145322
  • GC01P145326

Summaries for RNVU1-14 Gene

GeneCards Summary for RNVU1-14 Gene

RNVU1-14 (RNA, Variant U1 Small Nuclear 14) is an RNA Gene, and is affiliated with the snRNA class.

Additional gene information for RNVU1-14 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNVU1-14 Gene

Genomics for RNVU1-14 Gene

GeneHancer (GH) Regulatory Elements for RNVU1-14 Gene

Promoters and enhancers for RNVU1-14 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I145280 Promoter 0.6 Ensembl 550.8 +0.1 85 1.6 POLR2A ENSG00000276216 GC01P145331 LOC101060170 RNVU1-14
GH01I145282 Promoter 0.5 Ensembl 550.8 +1.2 1185 0.2 GC01P145331 LOC101060170 RNVU1-14 ENSG00000276216
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNVU1-14 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNVU1-14 Gene

Genomic Locations for RNVU1-14 Gene
chr1:145,281,116-145,281,279
(GRCh38/hg38)
Size:
164 bases
Orientation:
Plus strand
chr1:148,241,465-148,241,628
(GRCh37/hg19)

Genomic View for RNVU1-14 Gene

Genes around RNVU1-14 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNVU1-14 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNVU1-14 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNVU1-14 Gene

Proteins for RNVU1-14 Gene

Post-translational modifications for RNVU1-14 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNVU1-14 Gene

Domains & Families for RNVU1-14 Gene

Gene Families for RNVU1-14 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNVU1-14: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNVU1-14 Gene

Function for RNVU1-14 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNVU1-14 Gene

Localization for RNVU1-14 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNVU1-14 Gene

Pathways & Interactions for RNVU1-14 Gene

SuperPathways for RNVU1-14 Gene

No Data Available

Interacting Proteins for RNVU1-14 Gene

Gene Ontology (GO) - Biological Process for RNVU1-14 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNVU1-14 Gene

Drugs & Compounds for RNVU1-14 Gene

No Compound Related Data Available

Transcripts for RNVU1-14 Gene

mRNA/cDNA for RNVU1-14 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNVU1-14 Gene

No ASD Table

Relevant External Links for RNVU1-14 Gene

GeneLoc Exon Structure for
RNVU1-14
ECgene alternative splicing isoforms for
RNVU1-14

Expression for RNVU1-14 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNVU1-14 Gene

genes like me logo Genes that share expression patterns with RNVU1-14: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNVU1-14 Gene

Orthologs for RNVU1-14 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNVU1-14 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia U1 34
  • 90 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia U1 34
  • 90 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia U1 34
  • 89 (a)
ManyToMany
Species where no ortholog for RNVU1-14 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNVU1-14 Gene

ENSEMBL:
Gene Tree for RNVU1-14 (if available)
TreeFam:
Gene Tree for RNVU1-14 (if available)

Paralogs for RNVU1-14 Gene

No data available for Paralogs for RNVU1-14 Gene

Variants for RNVU1-14 Gene

Sequence variations from dbSNP and Humsavar for RNVU1-14 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs111653420 -- 145,281,193(+) A/C/T non_coding_transcript_variant
rs111840035 -- 145,280,126(+) A/G upstream_transcript_variant
rs112428966 -- 145,281,039(+) G/T upstream_transcript_variant
rs112430368 -- 145,280,920(+) A/C upstream_transcript_variant
rs112676235 -- 145,281,148(+) C/T non_coding_transcript_variant

Additional Variant Information for RNVU1-14 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNVU1-14

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNVU1-14 Gene

Disorders for RNVU1-14 Gene

Additional Disease Information for RNVU1-14

No disorders were found for RNVU1-14 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNVU1-14 Gene

Publications for RNVU1-14 Gene

  1. Differentially expressed, variant U1 snRNAs regulate gene expression in human cells. (PMID: 23070852) O'Reilly D … Murphy S (Genome research 2013) 2 3 58
  2. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3

Products for RNVU1-14 Gene

Sources for RNVU1-14 Gene

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