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Aliases for RNU7-97P Gene

Aliases for RNU7-97P Gene

  • RNA, U7 Small Nuclear 97 Pseudogene 2 3 5

External Ids for RNU7-97P Gene

Previous GeneCards Identifiers for RNU7-97P Gene

  • GC17M040593

Summaries for RNU7-97P Gene

GeneCards Summary for RNU7-97P Gene

RNU7-97P (RNA, U7 Small Nuclear 97 Pseudogene) is a Pseudogene.

Additional gene information for RNU7-97P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU7-97P Gene

Genomics for RNU7-97P Gene

GeneHancer (GH) Regulatory Elements for RNU7-97P Gene

Promoters and enhancers for RNU7-97P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I042441 Enhancer 1.2 Ensembl ENCODE dbSUPER 550.8 -1.7 -1652 1.2 ELF3 FOXA2 RARA ZSCAN5C ZNF143 CREM THAP11 HMG20B CEBPB PPARG RNU7-97P TUBG2 NAGLU ATP6V0A1
GH17I042438 Enhancer 0.4 dbSUPER 550.8 +1.1 1053 1 CTCF RAD21 RNU7-97P CAVIN1 LOC102725238
GH17I042535 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.3 -96.3 -96341 3.1 CLOCK MLX DMAP1 SLC30A9 ZNF213 E2F8 SP3 NFYC MEF2D SSRP1 NAGLU ENSG00000266929 ENSG00000267340 PLEKHH3 MLX HMGN1P29 NBR2 ENSG00000267002 PSMC3IP DHX58
GH17I042386 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11 +51.8 51811 4.3 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 STAT3 GC17M042386 ENSG00000267765 ENSG00000267002 ENSG00000259623 NBR1 CCR10 KAT2A CNTNAP1 KLHL10
GH17I042515 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 12 -81.6 -81634 12.2 PKNOX1 SMAD1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 MLX TUBG2 ENSG00000267002 CAVIN1 NAGLU ENSG00000267340 RAB5C KAT2A ATP6V0A1 RNU7-97P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU7-97P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-97P Gene

Genomic Locations for RNU7-97P Gene
chr17:42,440,198-42,440,259
(GRCh38/hg38)
Size:
62 bases
Orientation:
Minus strand
chr17:40,592,216-40,592,277
(GRCh37/hg19)

Genomic View for RNU7-97P Gene

Genes around RNU7-97P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-97P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-97P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-97P Gene

Proteins for RNU7-97P Gene

Post-translational modifications for RNU7-97P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-97P Gene

Domains & Families for RNU7-97P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-97P Gene

Function for RNU7-97P Gene

Phenotypes From GWAS Catalog for RNU7-97P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-97P Gene

Localization for RNU7-97P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-97P Gene

Pathways & Interactions for RNU7-97P Gene

SuperPathways for RNU7-97P Gene

No Data Available

Interacting Proteins for RNU7-97P Gene

Gene Ontology (GO) - Biological Process for RNU7-97P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-97P Gene

Drugs & Compounds for RNU7-97P Gene

No Compound Related Data Available

Transcripts for RNU7-97P Gene

mRNA/cDNA for RNU7-97P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-97P Gene

No ASD Table

Relevant External Links for RNU7-97P Gene

GeneLoc Exon Structure for
RNU7-97P
ECgene alternative splicing isoforms for
RNU7-97P

Expression for RNU7-97P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-97P Gene

Orthologs for RNU7-97P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RNU7-97P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U7 34
  • 98 (a)
OneToOne
Species where no ortholog for RNU7-97P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU7-97P Gene

ENSEMBL:
Gene Tree for RNU7-97P (if available)
TreeFam:
Gene Tree for RNU7-97P (if available)

Paralogs for RNU7-97P Gene

No data available for Paralogs for RNU7-97P Gene

Variants for RNU7-97P Gene

Additional Variant Information for RNU7-97P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-97P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-97P Gene

Disorders for RNU7-97P Gene

No disorders were found for RNU7-97P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-97P Gene

Publications for RNU7-97P Gene

No publications were found for RNU7-97P Gene.

Products for RNU7-97P Gene

Sources for RNU7-97P Gene

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