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Aliases for RNU7-72P Gene

Subcategory (RNA class) for RNU7-72P Gene

snRNA

Aliases for RNU7-72P Gene

  • RNA, U7 Small Nuclear 72 Pseudogene 2 3
  • U7.72 3

External Ids for RNU7-72P Gene

ORGUL Members for RNU7-72P Gene

Previous GeneCards Identifiers for RNU7-72P Gene

  • GC20U900369
  • GC20P048444

Summaries for RNU7-72P Gene

GeneCards Summary for RNU7-72P Gene

RNU7-72P (RNA, U7 Small Nuclear 72 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU7-72P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU7-72P Gene

Genomics for RNU7-72P Gene

GeneHancer (GH) Regulatory Elements for RNU7-72P Gene

Promoters and enhancers for RNU7-72P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I049850 Enhancer 0.7 ENCODE dbSUPER 12.5 +22.9 22883 0.2 ATF4 PKNOX1 GATA3 NFIB ZBTB40 FOXA1 RNU7-72P LOC100421569 SPATA2 ENSG00000199490 SLC9A8 RNF114 PIR45177
GH20I049810 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.4 -15.0 -14967 4.5 HDGF PKNOX1 CLOCK SMAD1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 SLC9A8 DDX27 RNF114 SPATA2 ENSG00000232043 RNU7-72P
GH20I049825 Enhancer 0.7 dbSUPER 0.8 -2.1 -2094 0.9 CTCF NFIA RXRA ZNF511 ARID4B ZNF644 ZSCAN9 RAD21 YY1 TEAD3 B4GALT5 RNU6-919P PTGIS RNU7-72P SLC9A8
GH20I049821 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -5.1 -5139 3.2 PKNOX1 FOXA2 RAD21 ZNF143 SMARCC2 ATF7 IKZF2 RUNX3 SMARCA5 RXRA B4GALT5 RNU6-919P SPATA2 PTGIS RNF114 SLC9A8 RNU7-72P
GH20I049818 Enhancer 0.5 dbSUPER 0.4 -9.0 -9042 1.9 ZNF217 ZNF146 HDAC2 ZMYM3 SPATA2 RNU6-919P PTGIS RNF114 SLC9A8 RNU7-72P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU7-72P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-72P Gene

Genomic Locations for RNU7-72P Gene
chr20:49,827,996-49,828,052
(GRCh38/hg38)
Size:
57 bases
Orientation:
Plus strand
chr20:48,444,529-48,444,590
(GRCh37/hg19)

Genomic View for RNU7-72P Gene

Genes around RNU7-72P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-72P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-72P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-72P Gene

Proteins for RNU7-72P Gene

Post-translational modifications for RNU7-72P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-72P Gene

Domains & Families for RNU7-72P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-72P Gene

Function for RNU7-72P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-72P Gene

Localization for RNU7-72P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-72P Gene

Pathways & Interactions for RNU7-72P Gene

SuperPathways for RNU7-72P Gene

No Data Available

Interacting Proteins for RNU7-72P Gene

Gene Ontology (GO) - Biological Process for RNU7-72P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-72P Gene

Drugs & Compounds for RNU7-72P Gene

No Compound Related Data Available

Transcripts for RNU7-72P Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-72P Gene

No ASD Table

Relevant External Links for RNU7-72P Gene

GeneLoc Exon Structure for
RNU7-72P
ECgene alternative splicing isoforms for
RNU7-72P

No data available for mRNA/cDNA for RNU7-72P Gene

Expression for RNU7-72P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-72P Gene

Orthologs for RNU7-72P Gene

No data available for Orthologs and Evolution for RNU7-72P Gene

Paralogs for RNU7-72P Gene

No data available for Paralogs for RNU7-72P Gene

Variants for RNU7-72P Gene

Additional Variant Information for RNU7-72P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-72P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-72P Gene

Disorders for RNU7-72P Gene

No disorders were found for RNU7-72P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-72P Gene

Publications for RNU7-72P Gene

  1. U7 snRNAs: a computational survey. (PMID: 18267300) Marz M … Stadler PF (Genomics, proteomics & bioinformatics 2007) 2 3 58

Products for RNU7-72P Gene

Sources for RNU7-72P Gene

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