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Aliases for RNU7-24P Gene

Subcategory (RNA class) for RNU7-24P Gene

snRNA

Aliases for RNU7-24P Gene

  • RNA, U7 Small Nuclear 24 Pseudogene 2 3 5
  • RNA, Small Nuclear U7 Pseudogene 3 2 3
  • RNA, Small Nuclear U7.24 Pseudogene 3
  • RNA, U7 Small Nuclear Pseudogene 3 3
  • HSU7.24 3
  • HSU7.25 3
  • RNU7P3 3
  • U7.24 3
  • U7 3

External Ids for RNU7-24P Gene

ORGUL Members for RNU7-24P Gene

Previous HGNC Symbols for RNU7-24P Gene

  • RNU7P3

Previous GeneCards Identifiers for RNU7-24P Gene

  • GC16U900834
  • GC16M024320
  • GC16M024321

Summaries for RNU7-24P Gene

GeneCards Summary for RNU7-24P Gene

RNU7-24P (RNA, U7 Small Nuclear 24 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU7-24P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU7-24P Gene

Genomics for RNU7-24P Gene

GeneHancer (GH) Regulatory Elements for RNU7-24P Gene

Promoters and enhancers for RNU7-24P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J024343 Enhancer 0.4 ENCODE 11.1 +56.2 56217 0.9 CEBPB TCF7L2 RNU7-24P GC16P024338 GC16M024363 CACNG3
GH16J024419 Enhancer 0.8 FANTOM5 Ensembl 0.4 -19.4 -19384 1.8 PKNOX1 CEBPB ELF1 USF1 ZBTB17 FOXA1 CTCF RBBP6 RNU7-24P LOC105371143
GH16J024431 Enhancer 0.9 Ensembl ENCODE 0.3 -31.2 -31184 1 RELA IKZF1 ZNF600 PRDM10 IKZF2 ZNF629 SMARCC1 CEBPB CHD2 JUN RNU7-24P LOC105371143
GH16J024463 Enhancer 0.8 Ensembl 0.2 -63.2 -63184 0.6 CBFA2T2 TRIM24 EGR1 SMARCA4 MTA1 GMEB1 DPF2 IKZF1 ZNF512 ZNF24 LOC105371143 RNU7-24P
GH16J024443 Enhancer 0.4 Ensembl ENCODE 0.3 -43.4 -43356 0.7 LOC105371143 RNU7-24P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU7-24P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-24P Gene

Genomic Locations for RNU7-24P Gene
chr16:24,400,056-24,400,117
(GRCh38/hg38)
Size:
62 bases
Orientation:
Minus strand
chr16:24,411,377-24,411,438
(GRCh37/hg19)
Size:
62 bases
Orientation:
Minus strand

Genomic View for RNU7-24P Gene

Genes around RNU7-24P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-24P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-24P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-24P Gene

Proteins for RNU7-24P Gene

Post-translational modifications for RNU7-24P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-24P Gene

Domains & Families for RNU7-24P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-24P Gene

Function for RNU7-24P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-24P Gene

Localization for RNU7-24P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-24P Gene

Pathways & Interactions for RNU7-24P Gene

PathCards logo

SuperPathways for RNU7-24P Gene

No Data Available

Interacting Proteins for RNU7-24P Gene

Gene Ontology (GO) - Biological Process for RNU7-24P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-24P Gene

Drugs & Compounds for RNU7-24P Gene

No Compound Related Data Available

Transcripts for RNU7-24P Gene

mRNA/cDNA for RNU7-24P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-24P Gene

No ASD Table

Relevant External Links for RNU7-24P Gene

GeneLoc Exon Structure for
RNU7-24P
ECgene alternative splicing isoforms for
RNU7-24P

Expression for RNU7-24P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-24P Gene

Orthologs for RNU7-24P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU7-24P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Gm25150 35
  • 72 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U7 35
  • 65 (a)
ManyToMany
chicken
(Gallus gallus)
Aves U7 35
  • 64 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia U7 35
  • 68 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii U7 35
  • 75 (a)
OneToMany
Species where no ortholog for RNU7-24P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU7-24P Gene

ENSEMBL:
Gene Tree for RNU7-24P (if available)
TreeFam:
Gene Tree for RNU7-24P (if available)

Paralogs for RNU7-24P Gene

No data available for Paralogs for RNU7-24P Gene

Variants for RNU7-24P Gene

Additional Variant Information for RNU7-24P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-24P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-24P Gene

Disorders for RNU7-24P Gene

Additional Disease Information for RNU7-24P

Genetic Association Database
(GAD)

No disorders were found for RNU7-24P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNU7-24P Gene

Publications for RNU7-24P Gene

  1. U7 snRNAs: a computational survey. (PMID: 18267300) Marz M … Stadler PF (Genomics, proteomics & bioinformatics 2007) 2 3 58
  2. Structures of four human pseudogenes for U7 small nuclear RNA. (PMID: 2249787) Soldati D … Schümperli D (Gene 1990) 2 3 58
  3. Voxelwise genome-wide association study (vGWAS). (PMID: 20171287) Stein JL … Alzheimer's Disease Neuroimaging Initiative (NeuroImage 2010) 45 58
  4. Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q. (PMID: 10493829) Loftus BJ … Adams MD (Genomics 1999) 3 58

No data available for External Links for RNU7-24P Gene

Products for RNU7-24P Gene

Sources for RNU7-24P Gene

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