Aliases for RNU7-22P Gene

Aliases for RNU7-22P Gene

  • RNA, U7 Small Nuclear 22 Pseudogene 2 3 5
  • RNA, Small Nuclear U7.22 Pseudogene 3
  • U7.22 3

External Ids for RNU7-22P Gene

Previous GeneCards Identifiers for RNU7-22P Gene

  • GC10U901062
  • GC10P032463

Summaries for RNU7-22P Gene

GeneCards Summary for RNU7-22P Gene

RNU7-22P (RNA, U7 Small Nuclear 22 Pseudogene) is a Pseudogene.

Additional gene information for RNU7-22P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU7-22P Gene

Genomics for RNU7-22P Gene

GeneHancer (GH) Regulatory Elements for RNU7-22P Gene

Promoters and enhancers for RNU7-22P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J032148 Enhancer 1.3 Ensembl ENCODE dbSUPER 12.1 -23.3 -23283 4 USF1 JUND FOS ZNF639 EP300 ZIC2 POLR2A TRIM28 ATF2 ZEB1 KIF5B ZEB1-AS1 RNU7-22P ENSG00000206660 CCDC7 RF00017-642 RF00017-643
GH10J032138 Enhancer 1.1 ENCODE dbSUPER 12 -33.7 -33660 3.4 NRF1 TCF12 JUND FOS ZIC2 POLR2A ZBTB11 REST DNMT1 RFX1 piR-30188-019 piR-48950-022 KIF5B RNU7-22P ENSG00000206660 RF00017-642
GH10J032142 Enhancer 0.7 Ensembl ENCODE dbSUPER 11.7 -30.6 -30606 1.8 FOS TFAP4 STAT3 RNU7-22P ENSG00000206660 KIF5B RF00017-642 piR-30188-019
GH10J032197 Enhancer 0.7 Ensembl ENCODE 11.2 +23.5 23532 1.6 ZNF217 GATAD2B CTBP1 ZNF592 FOXA1 NCOA3 GATA3 ZNF687 RNF2 ZNF770 KIF5B RNU7-22P ENSG00000206660 CCDC7 PPIAP31 lnc-EPC1-2
GH10J032130 Enhancer 0.7 Ensembl ENCODE 11.7 -41.7 -41683 3.2 NRF1 ZNF316 MAFF MAFK MAFG ZBTB33 EMSY KIF5B RNU7-22P ENSG00000206660 C1DP1 RPS4XP11 CCDC7 piR-48950-022 ENSG00000234811
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU7-22P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-22P Gene

Genomic Locations for RNU7-22P Gene
chr10:32,173,684-32,173,744
(GRCh38/hg38)
Size:
61 bases
Orientation:
Plus strand
chr10:32,462,612-32,462,672
(GRCh37/hg19)
Size:
61 bases
Orientation:
Plus strand

Genomic View for RNU7-22P Gene

Genes around RNU7-22P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-22P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-22P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-22P Gene

Proteins for RNU7-22P Gene

Post-translational modifications for RNU7-22P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-22P Gene

Domains & Families for RNU7-22P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU7-22P Gene

Function for RNU7-22P Gene

Phenotypes From GWAS Catalog for RNU7-22P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-22P Gene

Localization for RNU7-22P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-22P Gene

Pathways & Interactions for RNU7-22P Gene

PathCards logo

SuperPathways for RNU7-22P Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RNU7-22P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNU7-22P Gene

Drugs & Compounds for RNU7-22P Gene

No Compound Related Data Available

Transcripts for RNU7-22P Gene

mRNA/cDNA for RNU7-22P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-22P Gene

No ASD Table

Relevant External Links for RNU7-22P Gene

GeneLoc Exon Structure for
RNU7-22P

Expression for RNU7-22P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-22P Gene

Orthologs for RNU7-22P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RNU7-22P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U7 31
  • 100 (a)
OneToOne
Species where no ortholog for RNU7-22P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU7-22P Gene

ENSEMBL:
Gene Tree for RNU7-22P (if available)
TreeFam:
Gene Tree for RNU7-22P (if available)

Paralogs for RNU7-22P Gene

No data available for Paralogs for RNU7-22P Gene

Variants for RNU7-22P Gene

Additional Variant Information for RNU7-22P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-22P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-22P Gene

Disorders for RNU7-22P Gene

No disorders were found for RNU7-22P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-22P Gene

Publications for RNU7-22P Gene

  1. U7 snRNAs: a computational survey. (PMID: 18267300) Marz M … Stadler PF (Genomics, proteomics & bioinformatics 2007) 2 3 54

No data available for Mastermind for RNU7-22P Gene

Products for RNU7-22P Gene

Sources for RNU7-22P Gene