Aliases for RNU7-179P Gene

Aliases for RNU7-179P Gene

  • RNA, U7 Small Nuclear 179 Pseudogene 2 3 5

External Ids for RNU7-179P Gene

Previous GeneCards Identifiers for RNU7-179P Gene

  • GC01M015940

Summaries for RNU7-179P Gene

GeneCards Summary for RNU7-179P Gene

RNU7-179P (RNA, U7 Small Nuclear 179 Pseudogene) is a Pseudogene.

Additional gene information for RNU7-179P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU7-179P Gene

Genomics for RNU7-179P Gene

GeneHancer (GH) Regulatory Elements for RNU7-179P Gene

Promoters and enhancers for RNU7-179P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J015696 Enhancer 0.9 ENCODE dbSUPER 10.8 -89.4 -89416 1.9 SP1 MYC ETV6 RELA MAX ZNF121 NKRF MLLT1 POLR2A ZNF687 ENSG00000237938 SLC25A34 RSC1A1 FBLIM1 RNU7-179P HSPB7 SCARNA21B SZRD1 PLEKHM2 FAM131C
GH01J015629 Enhancer 0.8 ENCODE dbSUPER 11.2 -22.2 -22172 1.1 LCORL NFIB BCL6B ZNF544 PRDM10 ZNF662 ZNF491 ZNF112 NFIC NFIA TMEM51-AS1 SLC25A34 NBPF1 RSC1A1 PLEKHM2 RNU7-179P ENSG00000237938 SCARNA21B SPEN FBLIM1
GH01J015578 Enhancer 0.7 ENCODE dbSUPER 11.5 +28.2 28223 2.9 BCL6B MLLT1 PRDM10 MNT YY1 ZFHX2 SCARNA21B RNU7-179P PLEKHM2 RSC1A1 AGMAT piR-39114 DNAJC16
GH01J015631 Enhancer 0.6 dbSUPER 11.2 -23.2 -23211 0.7 LCORL NFIB BCL6B ZNF544 PRDM10 ZNF662 ZNF491 ZNF112 NFIC NFIA TMEM51-AS1 SLC25A34 NBPF1 RSC1A1 AGMAT PLEKHM2 RNU7-179P ENSG00000237938 SCARNA21B SPEN
GH01J015700 Enhancer 0.3 Ensembl dbSUPER 10.8 -92.3 -92256 1.2 piR-50437-009 SLC25A34 ENSG00000237938 RSC1A1 FBLIM1 RNU7-179P SCARNA21B PLEKHM2 RF00017-073
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU7-179P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-179P Gene

Genomic Locations for RNU7-179P Gene
chr1:15,608,078-15,608,145
(GRCh38/hg38)
Size:
68 bases
Orientation:
Minus strand
chr1:15,934,573-15,934,640
(GRCh37/hg19)
Size:
68 bases
Orientation:
Minus strand

Genomic View for RNU7-179P Gene

Genes around RNU7-179P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-179P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-179P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-179P Gene

Proteins for RNU7-179P Gene

Post-translational modifications for RNU7-179P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-179P Gene

Domains & Families for RNU7-179P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU7-179P Gene

Function for RNU7-179P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-179P Gene

Localization for RNU7-179P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-179P Gene

Pathways & Interactions for RNU7-179P Gene

PathCards logo

SuperPathways for RNU7-179P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNU7-179P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-179P Gene

Drugs & Compounds for RNU7-179P Gene

No Compound Related Data Available

Transcripts for RNU7-179P Gene

mRNA/cDNA for RNU7-179P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-179P Gene

No ASD Table

Relevant External Links for RNU7-179P Gene

GeneLoc Exon Structure for
RNU7-179P
ECgene alternative splicing isoforms for
RNU7-179P

Expression for RNU7-179P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-179P Gene

Orthologs for RNU7-179P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU7-179P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U7 33
  • 100 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia U7 33
  • 62 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia U7 33
  • 58 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm26010 33
  • 51 (a)
ManyToMany
chicken
(Gallus gallus)
Aves U7 33
  • 56 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia U7 33
  • 58 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii U7 33
  • 63 (a)
OneToMany
Species where no ortholog for RNU7-179P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU7-179P Gene

ENSEMBL:
Gene Tree for RNU7-179P (if available)
TreeFam:
Gene Tree for RNU7-179P (if available)

Paralogs for RNU7-179P Gene

No data available for Paralogs for RNU7-179P Gene

Variants for RNU7-179P Gene

Additional Variant Information for RNU7-179P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-179P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-179P Gene

Disorders for RNU7-179P Gene

No disorders were found for RNU7-179P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-179P Gene

Publications for RNU7-179P Gene

No publications were found for RNU7-179P Gene.

No data available for External Links for RNU7-179P Gene

Products for RNU7-179P Gene

Sources for RNU7-179P Gene