Aliases for RNU7-175P Gene

Aliases for RNU7-175P Gene

  • RNA, U7 Small Nuclear 175 Pseudogene 2 3 5

External Ids for RNU7-175P Gene

Previous GeneCards Identifiers for RNU7-175P Gene

  • GC05M074836

Summaries for RNU7-175P Gene

GeneCards Summary for RNU7-175P Gene

RNU7-175P (RNA, U7 Small Nuclear 175 Pseudogene) is a Pseudogene.

Additional gene information for RNU7-175P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU7-175P Gene

Genomics for RNU7-175P Gene

GeneHancer (GH) Regulatory Elements for RNU7-175P Gene

Promoters and enhancers for RNU7-175P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J075535 Enhancer 0.6 Ensembl 500.7 +1.2 1157 4.2 ZIC2 RFX1 OSR2 ZFHX2 FOXP2 CEBPB RFX5 EGR2 RBM39 ZNF770 RF00066-153 RNU7-175P RNU6-680P CERT1 POC5 GCNT4 ANKDD1B POLK
GH05J075523 Enhancer 0.8 ENCODE 0.4 +13.8 13766 2.5 NCOR1 CUX1 MEF2C ZBTB25 SKI TEAD1 TBX3 BCL11A TCF12 FOXA2 RF00066-153 RNU7-175P POLK CERT1
GH05J075546 Promoter 0.6 EPDnew 0.4 -8.3 -8315 0.1 TCF12 ZBTB33 CBFA2T3 POLK piR-38580-254 RF00066-153 RNU7-175P
GH05J075533 Enhancer 0.3 Ensembl ENCODE 0.7 +4.8 4754 1.2 CERT1 POC5 GCNT4 RF00066-153 RNU7-175P POLK
GH05J075518 Enhancer 0.4 Ensembl 0.4 +19.3 19257 1.2 MEF2B TBX21 MTA2 ARID3A RUNX3 GCNT4 CERT1 POLK RF00066-153 RNU7-175P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU7-175P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-175P Gene

Genomic Locations for RNU7-175P Gene
chr5:75,538,598-75,538,658
(GRCh38/hg38)
Size:
61 bases
Orientation:
Minus strand
chr5:74,834,423-74,834,483
(GRCh37/hg19)
Size:
61 bases
Orientation:
Minus strand

Genomic View for RNU7-175P Gene

Genes around RNU7-175P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-175P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-175P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-175P Gene

Proteins for RNU7-175P Gene

Post-translational modifications for RNU7-175P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-175P Gene

Domains & Families for RNU7-175P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU7-175P Gene

Function for RNU7-175P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-175P Gene

Localization for RNU7-175P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-175P Gene

Pathways & Interactions for RNU7-175P Gene

PathCards logo

SuperPathways for RNU7-175P Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RNU7-175P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNU7-175P Gene

Drugs & Compounds for RNU7-175P Gene

No Compound Related Data Available

Transcripts for RNU7-175P Gene

mRNA/cDNA for RNU7-175P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-175P Gene

No ASD Table

Relevant External Links for RNU7-175P Gene

GeneLoc Exon Structure for
RNU7-175P

Expression for RNU7-175P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-175P Gene

Orthologs for RNU7-175P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU7-175P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U7 31
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia U7 31
  • 82 (a)
OneToOne
Species where no ortholog for RNU7-175P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU7-175P Gene

ENSEMBL:
Gene Tree for RNU7-175P (if available)
TreeFam:
Gene Tree for RNU7-175P (if available)

Paralogs for RNU7-175P Gene

No data available for Paralogs for RNU7-175P Gene

Variants for RNU7-175P Gene

Additional Variant Information for RNU7-175P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-175P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-175P Gene

Disorders for RNU7-175P Gene

No disorders were found for RNU7-175P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-175P Gene

Publications for RNU7-175P Gene

No publications were found for RNU7-175P Gene.

No data available for Mastermind for RNU7-175P Gene

Products for RNU7-175P Gene

Sources for RNU7-175P Gene