Aliases for RNU7-161P Gene

Aliases for RNU7-161P Gene

  • RNA, U7 Small Nuclear 161 Pseudogene 2 3 5

External Ids for RNU7-161P Gene

Summaries for RNU7-161P Gene

GeneCards Summary for RNU7-161P Gene

RNU7-161P (RNA, U7 Small Nuclear 161 Pseudogene) is a Pseudogene.

Additional gene information for RNU7-161P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU7-161P Gene

Genomics for RNU7-161P Gene

GeneHancer (GH) Regulatory Elements for RNU7-161P Gene

Promoters and enhancers for RNU7-161P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J040910 Promoter/Enhancer 0.9 Ensembl ENCODE 500.7 -0.1 -72 3.2 MXI1 GATA3 RCOR1 GATA2 SOX5 YY1 ZNF384 PKNOX1 EZH2 EP300 C7 RF00066-151 RNU7-161P CARD6 TTC33 RF00017-4591
GH05J040909 Promoter 0.8 EPDnew 500.7 +1.7 1650 0.1 NR2F2 NCOR1 TAL1 STAT5A HDAC2 TCF12 RCOR1 GATA2 NR2F6 KDM1A C7 RF00066-151 RNU7-161P RF00017-4591
GH05J040916 Enhancer 0.2 Ensembl 0.4 -5.3 -5273 0.4 CARD6 C7 RF00066-151 RNU7-161P RF00017-4591
GH05J040929 Enhancer 0.2 Ensembl 0.4 -18.3 -18273 0.8 NONHSAG040259.2 RF00017-4591 CARD6 RF00066-151 C7 RNU7-161P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU7-161P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-161P Gene

Genomic Locations for RNU7-161P Gene
chr5:40,911,067-40,911,128
(GRCh38/hg38)
Size:
62 bases
Orientation:
Minus strand
chr5:40,911,169-40,911,230
(GRCh37/hg19)
Size:
62 bases
Orientation:
Minus strand

Genomic View for RNU7-161P Gene

Genes around RNU7-161P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-161P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-161P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-161P Gene

Proteins for RNU7-161P Gene

Post-translational modifications for RNU7-161P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-161P Gene

Domains & Families for RNU7-161P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU7-161P Gene

Function for RNU7-161P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-161P Gene

Localization for RNU7-161P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-161P Gene

Pathways & Interactions for RNU7-161P Gene

PathCards logo

SuperPathways for RNU7-161P Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RNU7-161P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNU7-161P Gene

Drugs & Compounds for RNU7-161P Gene

No Compound Related Data Available

Transcripts for RNU7-161P Gene

mRNA/cDNA for RNU7-161P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-161P Gene

No ASD Table

Relevant External Links for RNU7-161P Gene

GeneLoc Exon Structure for
RNU7-161P

Expression for RNU7-161P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-161P Gene

Orthologs for RNU7-161P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RNU7-161P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U7 31
  • 98 (a)
OneToOne
Species where no ortholog for RNU7-161P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU7-161P Gene

ENSEMBL:
Gene Tree for RNU7-161P (if available)
TreeFam:
Gene Tree for RNU7-161P (if available)

Paralogs for RNU7-161P Gene

No data available for Paralogs for RNU7-161P Gene

Variants for RNU7-161P Gene

Additional Variant Information for RNU7-161P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-161P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-161P Gene

Disorders for RNU7-161P Gene

No disorders were found for RNU7-161P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-161P Gene

Publications for RNU7-161P Gene

No publications were found for RNU7-161P Gene.

No data available for Mastermind for RNU7-161P Gene

Products for RNU7-161P Gene

Sources for RNU7-161P Gene