Aliases for RNU7-140P Gene

Aliases for RNU7-140P Gene

  • RNA, U7 Small Nuclear 140 Pseudogene 2 3 5
  • RNU7-140P 5

External Ids for RNU7-140P Gene

Previous GeneCards Identifiers for RNU7-140P Gene

  • GC19M010664

Summaries for RNU7-140P Gene

GeneCards Summary for RNU7-140P Gene

RNU7-140P (RNA, U7 Small Nuclear 140 Pseudogene) is a Pseudogene.

Additional gene information for RNU7-140P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU7-140P Gene

Genomics for RNU7-140P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RNU7-140P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J010514 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12 +33.9 33876 5.2 HNRNPL PRDM10 ZNF629 IKZF1 KDM1A ZIC2 ZSCAN4 PATZ1 ZNF501 EZH2 S1PR5 LOC100419831 ILF3 KRI1 QTRT1 ATG4D ZNF846 CDKN2D SLC44A2 ZNF562
GH19J010515 Enhancer 0.6 ENCODE dbSUPER 12 +36.8 36772 0.2 CTCF TEAD4 EZH2 ZBTB33 NRF1 POLR2A lnc-KEAP1-1 ATG4D KRI1 CDKN2D MIR1238 RNU7-140P ILF3 SLC44A2 S1PR5 KEAP1
GH19J010551 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -2.8 -2813 5.8 CTCF POLR2A FOXA1 ZIC2 RBFOX2 PKNOX1 PATZ1 TCF12 ZNF600 ZNF341 MIR1238 KRI1 CDKN2D SLC44A2 ILF3 AP1M2 RF00066-093 RNU7-140P lnc-CDKN2D-1 ATG4D
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU7-140P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RNU7-140P Gene

Genomic Locations for RNU7-140P Gene
chr19:10,551,033-10,551,092
(GRCh38/hg38)
Size:
60 bases
Orientation:
Minus strand
chr19:10,661,709-10,661,768
(GRCh37/hg19)
Size:
60 bases
Orientation:
Minus strand

Genomic View for RNU7-140P Gene

Genes around RNU7-140P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-140P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-140P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-140P Gene

Proteins for RNU7-140P Gene

Post-translational modifications for RNU7-140P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-140P Gene

Domains & Families for RNU7-140P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU7-140P Gene

Function for RNU7-140P Gene

Phenotypes From GWAS Catalog for RNU7-140P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-140P Gene

Localization for RNU7-140P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-140P Gene

Pathways & Interactions for RNU7-140P Gene

PathCards logo

SuperPathways for RNU7-140P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNU7-140P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNU7-140P Gene

Drugs & Compounds for RNU7-140P Gene

No Compound Related Data Available

Transcripts for RNU7-140P Gene

mRNA/cDNA for RNU7-140P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-140P Gene

No ASD Table

Relevant External Links for RNU7-140P Gene

GeneLoc Exon Structure for
RNU7-140P

Expression for RNU7-140P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNU7-140P Gene

genes like me logo Genes that share expression patterns with RNU7-140P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-140P Gene

Orthologs for RNU7-140P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RNU7-140P Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia U7 31
  • 100 (a)
OneToOne
Species where no ortholog for RNU7-140P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for RNU7-140P Gene

ENSEMBL:
Gene Tree for RNU7-140P (if available)
TreeFam:
Gene Tree for RNU7-140P (if available)

Paralogs for RNU7-140P Gene

No data available for Paralogs for RNU7-140P Gene

Variants for RNU7-140P Gene

Additional Variant Information for RNU7-140P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-140P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-140P Gene

Disorders for RNU7-140P Gene

No disorders were found for RNU7-140P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-140P Gene

Publications for RNU7-140P Gene

No publications were found for RNU7-140P Gene.

Products for RNU7-140P Gene

Sources for RNU7-140P Gene