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Aliases for RNU7-138P Gene

Subcategory (RNA class) for RNU7-138P Gene

snRNA

Aliases for RNU7-138P Gene

  • RNA, U7 Small Nuclear 138 Pseudogene 2 3 5

External Ids for RNU7-138P Gene

ORGUL Members for RNU7-138P Gene

Previous GeneCards Identifiers for RNU7-138P Gene

  • GC02P010887

Summaries for RNU7-138P Gene

GeneCards Summary for RNU7-138P Gene

RNU7-138P (RNA, U7 Small Nuclear 138 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU7-138P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU7-138P Gene

Genomics for RNU7-138P Gene

GeneHancer (GH) Regulatory Elements for RNU7-138P Gene

Promoters and enhancers for RNU7-138P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I010745 Enhancer 1 Ensembl ENCODE 550.8 +1.5 1545 1.2 HDGF BMI1 BATF IRF4 ZNF207 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 RNU7-138P GC02P010745 ATP6V1C2 LOC105373428
GH02I010764 Enhancer 0.3 ENCODE 11.8 +21.2 21196 1.2 KLF4 LOC105373428 RNU7-138P GC02P010745 ATP6V1C2
GH02I010737 Enhancer 0.6 ENCODE 0.4 -5.9 -5911 1.4 ELF3 GATAD2A FOXA2 SAP130 FOXA3 CEBPB CEBPG MIER3 CEBPA SMAD4 RNU7-138P ATP6V1C2
GH02I010721 Promoter 0.8 EPDnew 0.3 -22.6 -22575 0.1 SUZ12 GLIS1 ZBTB11 ZBTB26 ZXDB EZH2 ATP6V1C2 RNU7-138P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU7-138P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-138P Gene

Genomic Locations for RNU7-138P Gene
chr2:10,744,186-10,744,249
(GRCh38/hg38)
Size:
64 bases
Orientation:
Plus strand
chr2:10,884,312-10,884,375
(GRCh37/hg19)

Genomic View for RNU7-138P Gene

Genes around RNU7-138P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-138P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-138P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-138P Gene

Proteins for RNU7-138P Gene

Post-translational modifications for RNU7-138P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-138P Gene

Domains & Families for RNU7-138P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-138P Gene

Function for RNU7-138P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-138P Gene

Localization for RNU7-138P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-138P Gene

Pathways & Interactions for RNU7-138P Gene

SuperPathways for RNU7-138P Gene

No Data Available

Interacting Proteins for RNU7-138P Gene

Gene Ontology (GO) - Biological Process for RNU7-138P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-138P Gene

Drugs & Compounds for RNU7-138P Gene

No Compound Related Data Available

Transcripts for RNU7-138P Gene

mRNA/cDNA for RNU7-138P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-138P Gene

No ASD Table

Relevant External Links for RNU7-138P Gene

GeneLoc Exon Structure for
RNU7-138P
ECgene alternative splicing isoforms for
RNU7-138P

Expression for RNU7-138P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-138P Gene

Orthologs for RNU7-138P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU7-138P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U7 34
  • 94 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm25424 34
  • 79 (a)
ManyToMany
Gm23779 34
  • 73 (a)
ManyToMany
Gm24487 34
  • 73 (a)
ManyToMany
Gm22848 34
  • 72 (a)
ManyToMany
Gm23475 34
  • 71 (a)
ManyToMany
Gm24784 34
  • 71 (a)
ManyToMany
Gm25267 34
  • 71 (a)
ManyToMany
Gm22585 34
  • 70 (a)
ManyToMany
Gm26482 34
  • 68 (a)
ManyToMany
Gm25010 34
  • 66 (a)
ManyToMany
Gm23581 34
  • 65 (a)
ManyToMany
Gm23665 34
  • 65 (a)
ManyToMany
U7 34 34 34 34
  • 60 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U7 34
  • 62 (a)
ManyToMany
chicken
(Gallus gallus)
Aves U7 34
  • 61 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia U7 34
  • 65 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii U7 34
  • 73 (a)
OneToMany
Species where no ortholog for RNU7-138P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU7-138P Gene

ENSEMBL:
Gene Tree for RNU7-138P (if available)
TreeFam:
Gene Tree for RNU7-138P (if available)

Paralogs for RNU7-138P Gene

No data available for Paralogs for RNU7-138P Gene

Variants for RNU7-138P Gene

Additional Variant Information for RNU7-138P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-138P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-138P Gene

Disorders for RNU7-138P Gene

No disorders were found for RNU7-138P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-138P Gene

Publications for RNU7-138P Gene

No publications were found for RNU7-138P Gene.

Products for RNU7-138P Gene

Sources for RNU7-138P Gene

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