Aliases for RNU7-116P Gene

Aliases for RNU7-116P Gene

  • RNA, U7 Small Nuclear 116 Pseudogene 2 3 5

External Ids for RNU7-116P Gene

Previous GeneCards Identifiers for RNU7-116P Gene

  • GC14P064204

Summaries for RNU7-116P Gene

GeneCards Summary for RNU7-116P Gene

RNU7-116P (RNA, U7 Small Nuclear 116 Pseudogene) is a Pseudogene.

Additional gene information for RNU7-116P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU7-116P Gene

Genomics for RNU7-116P Gene

GeneHancer (GH) Regulatory Elements for RNU7-116P Gene

Promoters and enhancers for RNU7-116P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J063738 Enhancer 0.7 Ensembl 500.7 +1.5 1457 0.6 SP1 MEF2C ARNT MEF2B NBN BATF IRF4 IKZF1 E2F8 HDGF RNU7-116P piR-50444-110
GH14J063737 Enhancer 0.3 Ensembl 500.7 +0.9 857 0.2 ZNF316 ARNT RNU7-116P piR-50444-110
GH14J063541 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 10.3 -193.3 -193344 4.2 HNRNPK ZBTB40 ZNF217 CTCF SIN3A TCF12 NRF1 POLR2G SP1 GTF2E2 ENSG00000261242 PPP2R5E lnc-WDR89-4 ENSG00000259116 ENSG00000252800 SGPP1 RNU7-116P ZBTB1 piR-57460-192
GH14J063675 Enhancer 1.1 Ensembl ENCODE 11.5 -59.0 -58954 3.5 ZNF217 ZSCAN5C TCF12 ZNF639 ZNF10 ZIC2 ZBTB10 CLOCK ZNF510 TRIM28 piR-45035-061 ENSG00000200693 ENSG00000214770 SGPP1 RNU7-116P TEX21P ZBTB25 ENSG00000202182 SYNE2 WDR89
GH14J063764 Enhancer 0.9 Ensembl ENCODE 12.6 +28.1 28057 1 NCOR1 KDM6A TCF7 SKI ZKSCAN8 ZSCAN9 FOXA2 TBP SAP130 MIER3 RNU7-116P SGPP1 ENSG00000202182 SYNE2 ENSG00000258411 HMGN2P14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU7-116P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-116P Gene

Genomic Locations for RNU7-116P Gene
chr14:63,736,444-63,736,505
(GRCh38/hg38)
Size:
62 bases
Orientation:
Plus strand
chr14:64,203,162-64,203,223
(GRCh37/hg19)
Size:
62 bases
Orientation:
Plus strand

Genomic View for RNU7-116P Gene

Genes around RNU7-116P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-116P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-116P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-116P Gene

Proteins for RNU7-116P Gene

Post-translational modifications for RNU7-116P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-116P Gene

Domains & Families for RNU7-116P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU7-116P Gene

Function for RNU7-116P Gene

Phenotypes From GWAS Catalog for RNU7-116P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-116P Gene

Localization for RNU7-116P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-116P Gene

Pathways & Interactions for RNU7-116P Gene

PathCards logo

SuperPathways for RNU7-116P Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RNU7-116P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNU7-116P Gene

Drugs & Compounds for RNU7-116P Gene

No Compound Related Data Available

Transcripts for RNU7-116P Gene

mRNA/cDNA for RNU7-116P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-116P Gene

No ASD Table

Relevant External Links for RNU7-116P Gene

GeneLoc Exon Structure for
RNU7-116P

Expression for RNU7-116P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-116P Gene

Orthologs for RNU7-116P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU7-116P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U7 31
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U7 31
  • 81 (a)
OneToOne
Species where no ortholog for RNU7-116P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU7-116P Gene

ENSEMBL:
Gene Tree for RNU7-116P (if available)
TreeFam:
Gene Tree for RNU7-116P (if available)

Paralogs for RNU7-116P Gene

No data available for Paralogs for RNU7-116P Gene

Variants for RNU7-116P Gene

Additional Variant Information for RNU7-116P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-116P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-116P Gene

Disorders for RNU7-116P Gene

No disorders were found for RNU7-116P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-116P Gene

Publications for RNU7-116P Gene

No publications were found for RNU7-116P Gene.

No data available for Mastermind for RNU7-116P Gene

Products for RNU7-116P Gene

Sources for RNU7-116P Gene