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Aliases for RNU6-993P Gene

Aliases for RNU6-993P Gene

  • RNA, U6 Small Nuclear 993, Pseudogene 2 3 5

External Ids for RNU6-993P Gene

Previous GeneCards Identifiers for RNU6-993P Gene

  • GC00U935424

Summaries for RNU6-993P Gene

GeneCards Summary for RNU6-993P Gene

RNU6-993P (RNA, U6 Small Nuclear 993, Pseudogene) is a Pseudogene.

Additional gene information for RNU6-993P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-993P Gene

Genomics for RNU6-993P Gene

GeneHancer (GH) Regulatory Elements for RNU6-993P Gene

Promoters and enhancers for RNU6-993P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J002502 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -0.5 -474 2 EGR1 DPF2 PKNOX1 LEF1 GTF2F1 CTBP1 SMARCB1 MAX MAZ MXI1 GC19P002502 RNU6-993P GADD45B DOT1L GC19P002522
GH19J002615 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 13 -117.8 -117802 10.2 ELF3 ZNF121 ZNF687 MAFK TFE3 RELA SP1 SP5 CREM MLLT1 GADD45B SF3A2 RNU6-993P CACTIN-AS1 SLC39A3 TCF3 PEAK3 LOC100288123 ZNF77 DOT1L
GH19J002598 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 12.5 -96.2 -96197 1.5 SP1 MNT NKRF ZNF121 ZNF384 ZNF687 ZSCAN21 TFE3 SP7 SP5 RNU6-993P SLC39A3 PEAK3 LSM7 SPPL2B GADD45B DOT1L RN7SL121P ENSG00000267412 GNG7
GH19J002601 Enhancer 1 ENCODE dbSUPER 12.5 -99.6 -99628 2.9 ZNF121 SP1 PRDM1 ZBTB33 POLR2A RXRA ZNF600 PRDM10 ZNF512 ZIC2 RNU6-993P LSM7 SPPL2B ENSG00000267412 RN7SL121P GNG7
GH19J002506 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 0.7 -3.9 -3918 1.1 ELF3 MNT ZNF148 CEBPG ZNF24 TFE3 SP7 SP1 SP5 PRDM1 GADD45B DOT1L PEAK3 OAZ1 RNU6-993P GC19P002522
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU6-993P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-993P Gene

Genomic Locations for RNU6-993P Gene
chr19:2,503,047-2,503,141
(GRCh38/hg38)
Size:
95 bases
Orientation:
Minus strand

Genomic View for RNU6-993P Gene

Genes around RNU6-993P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-993P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-993P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-993P Gene

Proteins for RNU6-993P Gene

Post-translational modifications for RNU6-993P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-993P Gene

Domains & Families for RNU6-993P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-993P Gene

Function for RNU6-993P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-993P Gene

Localization for RNU6-993P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-993P Gene

Pathways & Interactions for RNU6-993P Gene

PathCards logo

SuperPathways for RNU6-993P Gene

No Data Available

Interacting Proteins for RNU6-993P Gene

Gene Ontology (GO) - Biological Process for RNU6-993P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-993P Gene

Drugs & Compounds for RNU6-993P Gene

No Compound Related Data Available

Transcripts for RNU6-993P Gene

mRNA/cDNA for RNU6-993P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-993P Gene

No ASD Table

Relevant External Links for RNU6-993P Gene

GeneLoc Exon Structure for
RNU6-993P
ECgene alternative splicing isoforms for
RNU6-993P

Expression for RNU6-993P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-993P Gene

Orthologs for RNU6-993P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-993P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 35
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia U6 35
  • 77 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U6 35
  • 72 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm25384 35
  • 72 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U6 35
  • 71 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U6 35
  • 65 (a)
ManyToMany
Species where no ortholog for RNU6-993P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-993P Gene

ENSEMBL:
Gene Tree for RNU6-993P (if available)
TreeFam:
Gene Tree for RNU6-993P (if available)

Paralogs for RNU6-993P Gene

No data available for Paralogs for RNU6-993P Gene

Variants for RNU6-993P Gene

Additional Variant Information for RNU6-993P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-993P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-993P Gene

Disorders for RNU6-993P Gene

No disorders were found for RNU6-993P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-993P Gene

Publications for RNU6-993P Gene

No publications were found for RNU6-993P Gene.

Products for RNU6-993P Gene

Sources for RNU6-993P Gene

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