Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RNU6-959P Gene

Subcategory (RNA class) for RNU6-959P Gene

snRNA

Aliases for RNU6-959P Gene

  • RNA, U6 Small Nuclear 959, Pseudogene 2 3 5

External Ids for RNU6-959P Gene

ORGUL Members for RNU6-959P Gene

Previous GeneCards Identifiers for RNU6-959P Gene

  • GC02P191988
  • GC00U934996

Summaries for RNU6-959P Gene

GeneCards Summary for RNU6-959P Gene

RNU6-959P (RNA, U6 Small Nuclear 959, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU6-959P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-959P Gene

Genomics for RNU6-959P Gene

GeneHancer (GH) Regulatory Elements for RNU6-959P Gene

Promoters and enhancers for RNU6-959P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I191122 Enhancer 0.6 dbSUPER 550.8 +0.9 863 1.1 NR2F1 JUNB BATF ATF2 IRF4 BCL11A TARDBP IKZF1 ATF7 ETV6 GC02P191122 RNU6-959P ENSG00000280083 STAT4
GH02I191147 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 12.5 +28.3 28282 6.7 PKNOX1 SIN3A IRF4 ZNF335 GLIS2 ATF7 IKZF2 RUNX3 ZBTB11 JUNB STAT4 RNU6-959P ENSG00000280083
GH02I191165 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.2 +47.7 47708 9.2 PKNOX1 FOXA2 NFIB ARID4B SIN3A ZNF2 RAD21 RFX5 YY1 ZNF335 MYO1B RNU6-959P ENSG00000227542 STAT4 HMGB1P27 ENSG00000280083
GH02I191177 Enhancer 1.1 Ensembl ENCODE dbSUPER 11.1 +57.4 57360 4 PKNOX1 RXRA NFIB MAX CEBPB YY1 ZNF217 GATA3 JUND ATF3 LOC105373804 MYO1B ENSG00000227542 RNU6-959P RNU6-1045P STAT4
GH02I191037 Enhancer 1.1 Ensembl ENCODE dbSUPER 10.5 -83.5 -83502 2.5 MEIS2 BACH1 MCM2 FOSL1 ZNF316 VEZF1 NFE2 FOS MAFK RFX1 RNU6-959P GC02P191043 LOC105373805 STAT4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU6-959P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-959P Gene

Genomic Locations for RNU6-959P Gene
chr2:191,121,950-191,122,056
(GRCh38/hg38)
Size:
107 bases
Orientation:
Plus strand

Genomic View for RNU6-959P Gene

Genes around RNU6-959P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-959P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-959P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for RNU6-959P Gene

Proteins for RNU6-959P Gene

Post-translational modifications for RNU6-959P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-959P Gene

Domains & Families for RNU6-959P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-959P Gene

Function for RNU6-959P Gene

Phenotypes From GWAS Catalog for RNU6-959P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-959P Gene

Localization for RNU6-959P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-959P Gene

Pathways & Interactions for RNU6-959P Gene

SuperPathways for RNU6-959P Gene

No Data Available

Interacting Proteins for RNU6-959P Gene

Gene Ontology (GO) - Biological Process for RNU6-959P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-959P Gene

Drugs & Compounds for RNU6-959P Gene

No Compound Related Data Available

Transcripts for RNU6-959P Gene

mRNA/cDNA for RNU6-959P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-959P Gene

No ASD Table

Relevant External Links for RNU6-959P Gene

GeneLoc Exon Structure for
RNU6-959P
ECgene alternative splicing isoforms for
RNU6-959P

Expression for RNU6-959P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-959P Gene

genes like me logo Genes that share expression patterns with RNU6-959P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-959P Gene

Orthologs for RNU6-959P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-959P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 34
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia U6 34
  • 81 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia U6 34 34
  • 79 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm25905 34
  • 72 (a)
OneToMany
Species where no ortholog for RNU6-959P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-959P Gene

ENSEMBL:
Gene Tree for RNU6-959P (if available)
TreeFam:
Gene Tree for RNU6-959P (if available)

Paralogs for RNU6-959P Gene

No data available for Paralogs for RNU6-959P Gene

Variants for RNU6-959P Gene

Additional Variant Information for RNU6-959P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-959P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-959P Gene

Disorders for RNU6-959P Gene

No disorders were found for RNU6-959P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-959P Gene

Publications for RNU6-959P Gene

No publications were found for RNU6-959P Gene.

Products for RNU6-959P Gene

Sources for RNU6-959P Gene

Content
Loading form....