Aliases for RNU6-919P Gene

Aliases for RNU6-919P Gene

  • RNA, U6 Small Nuclear 919, Pseudogene 2 3 5

External Ids for RNU6-919P Gene

Previous GeneCards Identifiers for RNU6-919P Gene

  • GC20P048413
  • GC00U934857

Summaries for RNU6-919P Gene

GeneCards Summary for RNU6-919P Gene

RNU6-919P (RNA, U6 Small Nuclear 919, Pseudogene) is a Pseudogene.

Additional gene information for RNU6-919P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU6-919P Gene

Genomics for RNU6-919P Gene

GeneHancer (GH) Regulatory Elements for RNU6-919P Gene

Promoters and enhancers for RNU6-919P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J049793 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 500.7 -0.5 -472 2.2 NCOR1 ZNF623 RBM25 KLF9 SAP130 CEBPB SPI1 BCOR ELF1 ZGPAT RF00026-648 RNU6-919P SLC9A8 SNAI1 B4GALT5 CEBPB TMEM189 RNF114 piR-35672-036
GH20J049762 Promoter/Enhancer 1.9 EPDnew FANTOM5 ENCODE dbSUPER 13.5 -24.6 -24562 14.7 EP300 FOXK2 ZNF217 CTCF TCF12 POLR2G NCOR1 JUND FOS TEAD4 B4GALT5 SLC9A8 DDX27 SNAI1 CEBPB RNU6-919P ZNFX1 PTGIS KCNB1 RNF114
GH20J049671 Enhancer 1.6 VISTA FANTOM5 ENCODE dbSUPER 11.1 -117.7 -117669 11.7 FOXK2 TCF12 NRF1 POLR2G NCOR1 JUND FOS ZNF639 EP300 REST SLC9A8 B4GALT5 RNF114 ZNFX1 KRT18P4 RNU6-919P SNAI1 TMEM189 piR-50443-242 HSALNG0130682
GH20J049582 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 10.6 -210.3 -210291 3.1 EP300 ZNF217 TCF12 POLR2G NCOR1 FOS KDM6A TCF7 FOXA1 RFX1 DDX27 PTGIS KCNB1 RNU6-919P SLC9A8 LOC105372651
GH20J049667 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 11.1 -125.5 -125455 3.5 ZBTB40 SP1 EP300 ZBTB26 JUND RELA MYC REST TRIM22 POLR2A LINC01273 SLC9A8 RNU6-919P B4GALT5 SPATA2 piR-50443-242 HSALNG0130682
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU6-919P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-919P Gene

Genomic Locations for RNU6-919P Gene
chr20:49,794,811-49,794,914
(GRCh38/hg38)
Size:
104 bases
Orientation:
Plus strand

Genomic View for RNU6-919P Gene

Genes around RNU6-919P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-919P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-919P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-919P Gene

Proteins for RNU6-919P Gene

Post-translational modifications for RNU6-919P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-919P Gene

Domains & Families for RNU6-919P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU6-919P Gene

Function for RNU6-919P Gene

Phenotypes From GWAS Catalog for RNU6-919P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-919P Gene

Localization for RNU6-919P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-919P Gene

Pathways & Interactions for RNU6-919P Gene

PathCards logo

SuperPathways for RNU6-919P Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RNU6-919P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RNU6-919P Gene

Drugs & Compounds for RNU6-919P Gene

No Compound Related Data Available

Transcripts for RNU6-919P Gene

mRNA/cDNA for RNU6-919P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-919P Gene

No ASD Table

Relevant External Links for RNU6-919P Gene

GeneLoc Exon Structure for
RNU6-919P

Expression for RNU6-919P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNU6-919P Gene

genes like me logo Genes that share expression patterns with RNU6-919P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-919P Gene

Orthologs for RNU6-919P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-919P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 31
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U6 31
  • 80 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm26203 31
  • 71 (a)
ManyToMany
Species where no ortholog for RNU6-919P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-919P Gene

ENSEMBL:
Gene Tree for RNU6-919P (if available)
TreeFam:
Gene Tree for RNU6-919P (if available)

Paralogs for RNU6-919P Gene

No data available for Paralogs for RNU6-919P Gene

Variants for RNU6-919P Gene

Additional Variant Information for RNU6-919P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-919P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-919P Gene

Disorders for RNU6-919P Gene

No disorders were found for RNU6-919P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-919P Gene

Publications for RNU6-919P Gene

No publications were found for RNU6-919P Gene.

Products for RNU6-919P Gene

Sources for RNU6-919P Gene