Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RNU6-850P Gene

Aliases for RNU6-850P Gene

  • RNA, U6 Small Nuclear 850, Pseudogene 2 3 5
  • RNA, U6 Small Nuclear 1030, Pseudogene 2 3
  • RNU6-1030P 3

External Ids for RNU6-850P Gene

Previous HGNC Symbols for RNU6-850P Gene

  • RNU6-1030P

Previous GeneCards Identifiers for RNU6-850P Gene

  • GC06M031726
  • GC00U935066

Summaries for RNU6-850P Gene

GeneCards Summary for RNU6-850P Gene

RNU6-850P (RNA, U6 Small Nuclear 850, Pseudogene) is a Pseudogene.

Additional gene information for RNU6-850P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-850P Gene

Genomics for RNU6-850P Gene

GeneHancer (GH) Regulatory Elements for RNU6-850P Gene

Promoters and enhancers for RNU6-850P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I031538 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 19.3 +215.9 215914 4.9 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 ZNF263 DDX39B DDX39B-AS1 GC06M031542 GC06M031543 GC06M031550 GC06M031555 GC06M031573 GC06M031962 GC06M031965 GC06M031970
GH06I031813 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.2 -68.8 -68823 25.6 CLOCK ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 C6orf48 HSPA1B HSPA1A HSPA1L GC06P032039 ATF6B DDX39B LY6G5B LSM2 BAG6
GH06I031805 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.3 -49.7 -49748 2 HDGF FOXA2 PKNOX1 CLOCK SMAD1 MLX ARNT ARID4B SIN3A DMAP1 LSM2 MSH5 ATF6B LY6G5B DDX39B SKIV2L PBX2 CSNK2B RPL3P2 VARS
GH06I031861 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.5 -107.1 -107063 4.5 MLX ZFP64 YBX1 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 NEU1 LY6G5B LSM2 DDX39B ATF6B GPANK1 MSH5 TCF19 CSNK2B MICA
GH06I031711 Enhancer 0.7 Ensembl 21.2 +45.8 45752 0.6 HDGF YBX3 KLF1 ZNF449 ETV1 KLF17 ZIC2 ZNF366 CBFA2T2 MCM3 LY6G5C LSM2 RNU6-850P MICA LY6G5B TCF19 DDX39B ENSG00000199332 TNXB MDC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU6-850P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-850P Gene

Genomic Locations for RNU6-850P Gene
chr6:31,756,951-31,757,053
(GRCh38/hg38)
Size:
103 bases
Orientation:
Minus strand

Genomic View for RNU6-850P Gene

Genes around RNU6-850P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-850P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-850P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for RNU6-850P Gene

Post-translational modifications for RNU6-850P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-850P Gene

Domains & Families for RNU6-850P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-850P Gene

Function for RNU6-850P Gene

Phenotypes From GWAS Catalog for RNU6-850P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-850P Gene

Localization for RNU6-850P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-850P Gene

Pathways & Interactions for RNU6-850P Gene

SuperPathways for RNU6-850P Gene

No Data Available

Interacting Proteins for RNU6-850P Gene

Gene Ontology (GO) - Biological Process for RNU6-850P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-850P Gene

Drugs & Compounds for RNU6-850P Gene

No Compound Related Data Available

Transcripts for RNU6-850P Gene

mRNA/cDNA for RNU6-850P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-850P Gene

No ASD Table

Relevant External Links for RNU6-850P Gene

GeneLoc Exon Structure for
RNU6-850P
ECgene alternative splicing isoforms for
RNU6-850P

Expression for RNU6-850P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-850P Gene

genes like me logo Genes that share expression patterns with RNU6-850P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-850P Gene

Orthologs for RNU6-850P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-850P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 34
  • 96 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U6 34
  • 65 (a)
OneToOne
Species where no ortholog for RNU6-850P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-850P Gene

ENSEMBL:
Gene Tree for RNU6-850P (if available)
TreeFam:
Gene Tree for RNU6-850P (if available)

Paralogs for RNU6-850P Gene

No data available for Paralogs for RNU6-850P Gene

Variants for RNU6-850P Gene

Additional Variant Information for RNU6-850P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-850P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-850P Gene

Disorders for RNU6-850P Gene

No disorders were found for RNU6-850P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-850P Gene

Publications for RNU6-850P Gene

No publications were found for RNU6-850P Gene.

Products for RNU6-850P Gene

Sources for RNU6-850P Gene

Content
Loading form....