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Aliases for RNU6-70P Gene

Aliases for RNU6-70P Gene

  • RNA, U6 Small Nuclear 70, Pseudogene 2 3 5
  • RNA, U6 Small Nuclear 70 2
  • RNU6-70 3

External Ids for RNU6-70P Gene

Previous HGNC Symbols for RNU6-70P Gene

  • RNU6-70

Previous GeneCards Identifiers for RNU6-70P Gene

  • GC13M027920

Summaries for RNU6-70P Gene

GeneCards Summary for RNU6-70P Gene

RNU6-70P (RNA, U6 Small Nuclear 70, Pseudogene) is a Pseudogene.

Additional gene information for RNU6-70P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-70P Gene

Genomics for RNU6-70P Gene

GeneHancer (GH) Regulatory Elements for RNU6-70P Gene

Promoters and enhancers for RNU6-70P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J026961 Enhancer 1.4 Ensembl ENCODE dbSUPER 11.8 +376.8 376828 11.8 PKNOX1 FOXA2 MLX ZFP64 ARID4B FEZF1 DMAP1 YY1 SLC30A9 ZNF143 RNU6-70P CDK8 MTIF3 POLR1D RPS21P8 ENSG00000283579 FGFR1OP2P1
GH13J026977 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 11.8 +365.6 365591 1.9 NCOA3 PKNOX1 L3MBTL2 NEUROD1 MAX NFXL1 ZNF217 CTBP1 GATA3 GLIS1 RPS21P8 RNU6-70P RASL11A GTF3A ENSG00000283579
GH13J027034 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 10.8 +307.4 307372 3.5 SMARCC1 NRF1 BACH1 SIN3A ZMYM3 ZNF16 ZIC2 NR2F2 SP1 FOSL1 RPL21 RASL11A RNU6-70P POLR1D WASF3 GPR12 GC13P027043 RPS20P32
GH13J026949 Enhancer 1.1 ENCODE dbSUPER 11.8 +389.8 389803 8.6 PKNOX1 FOXA2 ARNT FEZF1 DMAP1 YY1 ZNF121 ZNF213 KLF7 RXRA RNU6-70P RASL11A POLR1D RPS21P8 FGFR1OP2P1
GH13J026976 Enhancer 1 ENCODE dbSUPER 11.8 +367.2 367167 0.2 HDAC1 TEAD4 TAL1 TCF12 CC2D1A CTBP1 ZNF766 GATA2 FOXK2 NCOR1 RPS21P8 RNU6-70P ENSG00000283579 FGFR1OP2P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU6-70P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-70P Gene

Genomic Locations for RNU6-70P Gene
chr13:27,343,687-27,343,746
(GRCh38/hg38)
Size:
60 bases
Orientation:
Minus strand
chr13:27,917,785-27,917,883
(GRCh37/hg19)
Size:
99 bases
Orientation:
Minus strand

Genomic View for RNU6-70P Gene

Genes around RNU6-70P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-70P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-70P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-70P Gene

Function for RNU6-70P Gene

Phenotypes From GWAS Catalog for RNU6-70P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-70P Gene

Localization for RNU6-70P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-70P Gene

Pathways & Interactions for RNU6-70P Gene

SuperPathways for RNU6-70P Gene

No Data Available

Interacting Proteins for RNU6-70P Gene

Gene Ontology (GO) - Biological Process for RNU6-70P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-70P Gene

Drugs & Compounds for RNU6-70P Gene

No Compound Related Data Available

Transcripts for RNU6-70P Gene

mRNA/cDNA for RNU6-70P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-70P Gene

No ASD Table

Relevant External Links for RNU6-70P Gene

GeneLoc Exon Structure for
RNU6-70P
ECgene alternative splicing isoforms for
RNU6-70P

Expression for RNU6-70P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-70P Gene

genes like me logo Genes that share expression patterns with RNU6-70P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-70P Gene

Orthologs for RNU6-70P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU6-70P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 34
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U6 34
  • 70 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm24917 34
  • 66 (a)
OneToMany
dog
(Canis familiaris)
Mammalia U6 34
  • 62 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia U6 34
  • 69 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea U6 34
  • 62 (a)
ManyToMany
Species where no ortholog for RNU6-70P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-70P Gene

ENSEMBL:
Gene Tree for RNU6-70P (if available)
TreeFam:
Gene Tree for RNU6-70P (if available)

Paralogs for RNU6-70P Gene

No data available for Paralogs for RNU6-70P Gene

Variants for RNU6-70P Gene

Additional Variant Information for RNU6-70P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-70P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-70P Gene

Disorders for RNU6-70P Gene

No disorders were found for RNU6-70P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-70P Gene

Publications for RNU6-70P Gene

No publications were found for RNU6-70P Gene.

Products for RNU6-70P Gene

Sources for RNU6-70P Gene

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