Aliases for RNU6-362P Gene

Aliases for RNU6-362P Gene

  • RNA, U6 Small Nuclear 362, Pseudogene 2 3 5

External Ids for RNU6-362P Gene

Previous GeneCards Identifiers for RNU6-362P Gene

  • GC17P073036
  • GC00U934981

Summaries for RNU6-362P Gene

GeneCards Summary for RNU6-362P Gene

RNU6-362P (RNA, U6 Small Nuclear 362, Pseudogene) is a Pseudogene.

Additional gene information for RNU6-362P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RNU6-362P Gene

Genomics for RNU6-362P Gene

GeneHancer (GH) Regulatory Elements for RNU6-362P Gene

Promoters and enhancers for RNU6-362P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J074967 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 11.1 -60.5 -60501 5.6 ZBTB6 TCF7L2 L3MBTL2 ZNF121 MNT SP7 MYC PRDM1 POLR2A SP5 HID1 HID1-AS1 OTOP3 TMEM94 KCTD2 RNU6-362P ATP5PD TTYH2 RF00017-2543 lnc-USH1G-3
GH17J075059 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 11.6 +29.4 29383 2.2 CTCF L3MBTL2 MAX RAD21 MNT ZNF384 REST HDAC1 ATF3 FOXK2 ENSG00000270993 ATP5PD JPT1 RNU6-362P piR-38757 KCTD2
GH17J075009 Enhancer 1 Ensembl ENCODE dbSUPER 11.5 -21.7 -21706 0.4 ZIC2 ZBTB8A ZNF561 ZBTB20 ZSCAN5C ZBTB48 ZNF10 OSR2 SCRT1 DPF2 CDR2L RNU6-362P KCTD2 ATP5PD FADS6 MRPL58 piR-56216-002
GH17J075065 Enhancer 0.9 Ensembl ENCODE dbSUPER 11.6 +35.7 35679 3.6 POLR2A ZNF362 IKZF1 REST PRDM10 IKZF2 ZNF316 EED RUNX3 ATF2 piR-32360 piR-58581 ATP5PD JPT1 NT5C RNU6-362P KCTD2
GH17J074989 Enhancer 1 ENCODE dbSUPER 11.2 -39.1 -39137 4.1 RBPJ NR2F1 HLF ZNF121 ELF3 MAFK TFE3 PRDM1 HNF1A SP5 HID1 RNU6-362P OTOP3 KCTD2 ATP5PD FADS6 MRPL58 CDR2L RF00017-2544
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RNU6-362P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-362P Gene

Genomic Locations for RNU6-362P Gene
chr17:75,031,097-75,031,186
(GRCh38/hg38)
Size:
90 bases
Orientation:
Plus strand

Genomic View for RNU6-362P Gene

Genes around RNU6-362P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-362P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-362P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-362P Gene

Proteins for RNU6-362P Gene

Post-translational modifications for RNU6-362P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-362P Gene

Domains & Families for RNU6-362P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RNU6-362P Gene

Function for RNU6-362P Gene

Phenotypes From GWAS Catalog for RNU6-362P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-362P Gene

Localization for RNU6-362P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-362P Gene

Pathways & Interactions for RNU6-362P Gene

PathCards logo

SuperPathways for RNU6-362P Gene

No Data Available

Gene Ontology (GO) - Biological Process for RNU6-362P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-362P Gene

Drugs & Compounds for RNU6-362P Gene

No Compound Related Data Available

Transcripts for RNU6-362P Gene

mRNA/cDNA for RNU6-362P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-362P Gene

No ASD Table

Relevant External Links for RNU6-362P Gene

GeneLoc Exon Structure for
RNU6-362P
ECgene alternative splicing isoforms for
RNU6-362P

Expression for RNU6-362P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-362P Gene

genes like me logo Genes that share expression patterns with RNU6-362P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-362P Gene

Orthologs for RNU6-362P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU6-362P Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia U6 33
  • 61 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia U6 33
  • 56 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia U6 33
  • 55 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia U6 33
  • 50 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia U6 33
  • 43 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia U6 33
  • 55 (a)
ManyToMany
Species where no ortholog for RNU6-362P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-362P Gene

ENSEMBL:
Gene Tree for RNU6-362P (if available)
TreeFam:
Gene Tree for RNU6-362P (if available)

Paralogs for RNU6-362P Gene

No data available for Paralogs for RNU6-362P Gene

Variants for RNU6-362P Gene

Additional Variant Information for RNU6-362P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-362P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-362P Gene

Disorders for RNU6-362P Gene

No disorders were found for RNU6-362P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-362P Gene

Publications for RNU6-362P Gene

No publications were found for RNU6-362P Gene.

No data available for External Links for RNU6-362P Gene

Products for RNU6-362P Gene

Sources for RNU6-362P Gene